RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 DQX1Q8TE96 717 aaKnown RBP16.43■□□□□ 0.22
VRK3-221ENST00000600284 FAM149B1Q96BN6 582 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 SIPA1Q96FS4 1042 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 SLC39A13Q96H72 371 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 CLSTN2Q9H4D0 955 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 THAP9Q9H5L6 903 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 POPDC2Q9HBU9 364 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 ABCB8Q9NUT2 735 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 WSB2Q9NYS7 404 aaPredicted RBP16.43■□□□□ 0.22
VRK3-221ENST00000600284 GGA2Q9UJY4 613 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 NFE2L3Q9Y4A8 694 aa16.43■□□□□ 0.22
VRK3-221ENST00000600284 TYW5A2RUC4 315 aaKnown RBP16.42■□□□□ 0.22
VRK3-221ENST00000600284 CAPN9O14815 690 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 IGLV3-19P01714 112 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 ATP5BP06576 529 aaKnown RBP16.42■□□□□ 0.22
VRK3-221ENST00000600284 EPHX1P07099 455 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 PABPC1P11940 636 aaKnown RBP16.42■□□□□ 0.22
VRK3-221ENST00000600284 CSRP1P21291 193 aaKnown RBP16.42■□□□□ 0.22
VRK3-221ENST00000600284 PON1P27169 355 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 ERCC5P28715 1186 aaPredicted RBP16.42■□□□□ 0.22
VRK3-221ENST00000600284 MTIF2P46199 727 aaKnown RBP16.42■□□□□ 0.22
VRK3-221ENST00000600284 COPAP53621 1224 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 YWHAZP63104 245 aaKnown RBP16.42■□□□□ 0.22
VRK3-221ENST00000600284 WDR45BQ5MNZ6 344 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 ADIPOR2Q86V24 386 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 SLC41A1Q8IVJ1 513 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 FAM114A1Q8IWE2 563 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 DEFB119Q8N690 84 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 CADM4Q8NFZ8 388 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 SHC3Q92529 594 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 PRCCQ92733 491 aaPredicted RBP16.42■□□□□ 0.22
VRK3-221ENST00000600284 ERLEC1Q96DZ1 483 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 FCRL2Q96LA5 508 aaPredicted RBP16.42■□□□□ 0.22
VRK3-221ENST00000600284 SLC6A17Q9H1V8 727 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 TMEM245Q9H330 911 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 FBRSQ9HAH7 460 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 CAPN10Q9HC96 672 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 SUSD2Q9UGT4 822 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 NAALADL1Q9UQQ1 740 aa16.42■□□□□ 0.22
VRK3-221ENST00000600284 TNRC6BQ9UPQ9 1833 aaKnown RBP16.42■□□□□ 0.22
VRK3-221ENST00000600284 LAMA1P25391 3075 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 GOLGA6L7A0A1B0GV03 622 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 BECN2A8MW95 431 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 E5RJQ4 531 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 PAPSS1O43252 624 aaPredicted RBP16.41■□□□□ 0.22
VRK3-221ENST00000600284 TBL1XO60907 577 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 GLI1P08151 1106 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 DLDP09622 509 aaKnown RBP16.41■□□□□ 0.22
VRK3-221ENST00000600284 ACADMP11310 421 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 CEACAM1P13688 526 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 ENGP17813 658 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 KCNA4P22459 653 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 PRKCHP24723 683 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 PMLP29590 882 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 SLC6A4P31645 630 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 GFPT1Q06210 699 aaPredicted RBP16.41■□□□□ 0.22
VRK3-221ENST00000600284 CAMK2GQ13555 558 aaPredicted RBP16.41■□□□□ 0.22
VRK3-221ENST00000600284 MAN2A1Q16706 1144 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 ARHGAP44Q17R89 818 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 CT47A1Q5JQC4 288 aaPredicted RBP16.41■□□□□ 0.22
VRK3-221ENST00000600284 MBLAC2Q68D91 279 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 RFWD3Q6PCD5 774 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 GJB7Q6PEY0 223 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 HJURPQ8NCD3 748 aaPredicted RBP16.41■□□□□ 0.22
VRK3-221ENST00000600284 OR2T3Q8NH03 318 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 FIBINQ8TAL6 211 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 SORCS1Q8WY21 1168 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 TOE1Q96GM8 510 aaKnown RBP16.41■□□□□ 0.22
VRK3-221ENST00000600284 HSPA12BQ96MM6 686 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 LHX5Q9H2C1 402 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 DACH1Q9UI36 760 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 CYTH4Q9UIA0 394 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 PCDHGC3Q9UN70 934 aa16.41■□□□□ 0.22
VRK3-221ENST00000600284 CNOT1A5YKK6 2376 aaKnown RBP16.41■□□□□ 0.22
VRK3-221ENST00000600284 GON4LQ3T8J9 2241 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 UPK3BL1B0FP48 263 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 UPK3BL2E5RIL1 263 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 CFIP05156 583 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 POLR2EP19388 210 aaKnown RBP16.4■□□□□ 0.22
VRK3-221ENST00000600284 USP8P40818 1118 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 NOVA1P51513 510 aaKnown RBP16.4■□□□□ 0.22
VRK3-221ENST00000600284 TPMTP51580 245 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 SGSHP51688 502 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 SNX16P57768 344 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 PTK2Q05397 1052 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 PDCLQ13371 301 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 PTPRNQ16849 979 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 FNDC3BQ53EP0 1204 aaKnown RBP16.4■□□□□ 0.22
VRK3-221ENST00000600284 SYPL2Q5VXT5 272 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 NADSYN1Q6IA69 706 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 PSAPL1Q6NUJ1 521 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 MFN1Q8IWA4 741 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 CCDC117Q8IWD4 279 aaPredicted RBP16.4■□□□□ 0.22
VRK3-221ENST00000600284 DNASE2BQ8WZ79 361 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 TTC17Q96AE7 1141 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 LMLNQ96KR4 655 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 CNTNAP3BQ96NU0 1288 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 NUP58Q9BVL2 599 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 CNTNAP3Q9BZ76 1288 aa16.4■□□□□ 0.22
VRK3-221ENST00000600284 ACP6Q9NPH0 428 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms