RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 RCOR2Q8IZ40 523 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 SLC44A3Q8N4M1 653 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 UBL4BQ8N7F7 174 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 CD101Q93033 1021 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 EPAS1Q99814 870 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 PRMT1Q99873 361 aaKnown RBP12.72□□□□□ -0.37
TGFB1-204ENST00000600196 ADAM33Q9BZ11 813 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 TRIM7Q9C029 511 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 KCNK12Q9HB15 430 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 LZTFL1Q9NQ48 299 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 SLC2A4RGQ9NR83 387 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 DUS2Q9NX74 493 aaKnown RBP12.72□□□□□ -0.37
TGFB1-204ENST00000600196 SMPD4Q9NXE4 827 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 CALCOCO1Q9P1Z2 691 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 STIM2Q9P246 746 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 OR12D3Q9UGF7 316 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 CCL26Q9Y258 94 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 JRKLQ9Y4A0 524 aa12.72□□□□□ -0.37
TGFB1-204ENST00000600196 SZT2Q5T011 3432 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 WASH4PA8MWX3 477 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 F5H5T6 163 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 FGF10O15520 208 aaPredicted RBP12.71□□□□□ -0.37
TGFB1-204ENST00000600196 HOXC11O43248 304 aaPredicted RBP12.71□□□□□ -0.37
TGFB1-204ENST00000600196 MSI1O43347 362 aaKnown RBP12.71□□□□□ -0.37
TGFB1-204ENST00000600196 BUB1O43683 1085 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 PALMO75781 387 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 ADH1CP00326 375 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 IL9P15248 144 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 PRLRP16471 622 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 TFE3P19532 575 aaPredicted RBP12.71□□□□□ -0.37
TGFB1-204ENST00000600196 HOXC13P31276 330 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 VIPR2P41587 438 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 TFF2Q03403 129 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 GAD2Q05329 585 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 SEMA3BQ13214 749 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 TDGQ13569 410 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 AUHQ13825 339 aaKnown RBP12.71□□□□□ -0.37
TGFB1-204ENST00000600196 MS4A13Q5J8X5 152 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 SH3PXD2AQ5TCZ1 1133 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 PIK3R6Q5UE93 754 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 CHST9Q7L1S5 443 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 CPA6Q8N4T0 437 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 EXD1Q8NHP7 514 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 ADAM32Q8TC27 787 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 FGF14Q92915 247 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 TMA16Q96EY4 203 aaKnown RBP12.71□□□□□ -0.37
TGFB1-204ENST00000600196 HES6Q96HZ4 224 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 RPGRIP1Q96KN7 1286 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 C8orf33Q9H7E9 229 aaPredicted RBP12.71□□□□□ -0.37
TGFB1-204ENST00000600196 CATSPERBQ9H7T0 1116 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 ZWILCHQ9H900 591 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 SPHK2Q9NRA0 654 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 LIMD1Q9UGP4 676 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 CDH22Q9UJ99 828 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 PYCARDQ9ULZ3 195 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 NUMBLQ9Y6R0 609 aa12.71□□□□□ -0.37
TGFB1-204ENST00000600196 CLDN11O75508 207 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 ZNF189O75820 626 aaPredicted RBP12.7□□□□□ -0.38
TGFB1-204ENST00000600196 ZRANB2O95218 330 aaKnown RBP eCLIP12.7□□□□□ -0.38
TGFB1-204ENST00000600196 MOCS3O95396 460 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 PENKP01210 267 aaPredicted RBP12.7□□□□□ -0.38
TGFB1-204ENST00000600196 RARAP10276 462 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 TACR2P21452 398 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 ARL4AP40617 200 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 PEX5P50542 639 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 ARSEP51690 589 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 RWDD2BP57060 319 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 SLC12A1Q13621 1099 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 EML3Q32P44 896 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 ITPRIPL2Q3MIP1 535 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 FAM133BQ5BKY9 247 aaKnown RBP12.7□□□□□ -0.38
TGFB1-204ENST00000600196 TJAP1Q5JTD0 557 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 MEI1Q5TIA1 1274 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 MANEALQ5VSG8 457 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 ZNF783Q6ZMS7 281 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 CYP4V2Q6ZWL3 525 aaPredicted RBP12.7□□□□□ -0.38
TGFB1-204ENST00000600196 LRRC49Q8IUZ0 686 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 CCDC117Q8IWD4 279 aaPredicted RBP12.7□□□□□ -0.38
TGFB1-204ENST00000600196 BBS7Q8IWZ6 715 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 UBALD2Q8IYN6 164 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 LZTR1Q8N653 840 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 HJURPQ8NCD3 748 aaPredicted RBP12.7□□□□□ -0.38
TGFB1-204ENST00000600196 CCDC26Q8TAB7 109 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 RSPRY1Q96DX4 576 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 RBM41Q96IZ5 413 aaKnown RBP12.7□□□□□ -0.38
TGFB1-204ENST00000600196 BTBD6Q96KE9 485 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 LRRC3BQ96PB8 259 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 ZNF670Q9BS34 389 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 FBXO10Q9UK96 956 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 AP4E1Q9UPM8 1137 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 HS3ST4Q9Y661 456 aa12.7□□□□□ -0.38
TGFB1-204ENST00000600196 HELZP42694 1942 aaKnown RBP12.69□□□□□ -0.38
TGFB1-204ENST00000600196 SYNJ2BP-COX16A0A087WUM0 186 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.69□□□□□ -0.38
TGFB1-204ENST00000600196 H3BRJ5 948 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 ARNTLO00327 626 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 CES2O00748 559 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 HMBSP08397 361 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 SRFP11831 508 aa12.69□□□□□ -0.38
TGFB1-204ENST00000600196 ZFXP17010 805 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms