RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ASCL5Q7RTU5 278 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 ANKS1BQ7Z6G8 1248 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 PHLDB2Q86SQ0 1253 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 CHSY1Q86X52 802 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 HJURPQ8NCD3 748 aaPredicted RBP29.24■■■□□ 2.27
SSBP4-206ENST00000599699 NUCKS1Q9H1E3 243 aaKnown RBP29.24■■■□□ 2.27
SSBP4-206ENST00000599699 STARD13Q9Y3M8 1113 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 PIEZO1Q92508 2521 aa29.24■■■□□ 2.27
SSBP4-206ENST00000599699 UNGP13051 313 aaPredicted RBP29.23■■■□□ 2.27
SSBP4-206ENST00000599699 CRY1Q16526 586 aa29.23■■■□□ 2.27
SSBP4-206ENST00000599699 GEN1Q17RS7 908 aa29.23■■■□□ 2.27
SSBP4-206ENST00000599699 SFMBT2Q5VUG0 894 aa29.23■■■□□ 2.27
SSBP4-206ENST00000599699 EGFLAMQ63HQ2 1017 aa29.23■■■□□ 2.27
SSBP4-206ENST00000599699 RAP1GAP2Q684P5 730 aa29.23■■■□□ 2.27
SSBP4-206ENST00000599699 SDE2Q6IQ49 451 aa29.23■■■□□ 2.27
SSBP4-206ENST00000599699 IRF2BP2Q7Z5L9 587 aa29.23■■■□□ 2.27
SSBP4-206ENST00000599699 WDR5BQ86VZ2 330 aa29.23■■■□□ 2.27
SSBP4-206ENST00000599699 IRX2Q9BZI1 471 aaPredicted RBP29.23■■■□□ 2.27
SSBP4-206ENST00000599699 ADAM22Q9P0K1 906 aa29.23■■■□□ 2.27
SSBP4-206ENST00000599699 IFNKQ9P0W0 207 aa29.23■■■□□ 2.27
SSBP4-206ENST00000599699 KCNU1A8MYU2 1149 aa29.22■■■□□ 2.27
SSBP4-206ENST00000599699 CHRM1P11229 460 aaPredicted RBP29.22■■■□□ 2.27
SSBP4-206ENST00000599699 WASP42768 502 aa29.22■■■□□ 2.27
SSBP4-206ENST00000599699 DGKEP52429 567 aa29.22■■■□□ 2.27
SSBP4-206ENST00000599699 EIF4EBP2Q13542 120 aaPredicted RBP29.22■■■□□ 2.27
SSBP4-206ENST00000599699 SND1Q7KZF4 910 aaKnown RBP eCLIP29.22■■■□□ 2.27
SSBP4-206ENST00000599699 CHPFQ8IZ52 775 aa29.22■■■□□ 2.27
SSBP4-206ENST00000599699 LGI2Q8N0V4 545 aa29.22■■■□□ 2.27
SSBP4-206ENST00000599699 NPY6RQ99463 290 aa29.22■■■□□ 2.27
SSBP4-206ENST00000599699 METTL5Q9NRN9 209 aaKnown RBP29.22■■■□□ 2.27
SSBP4-206ENST00000599699 TACR2P21452 398 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 TNFAIP3P21580 790 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 NTSR1P30989 418 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 HOXD11P31277 338 aaPredicted RBP29.21■■■□□ 2.27
SSBP4-206ENST00000599699 CENPCQ03188 943 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 MS4A13Q5J8X5 152 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 MPP7Q5T2T1 576 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 TMEM92Q6UXU6 159 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 CCDC117Q8IWD4 279 aaPredicted RBP29.21■■■□□ 2.27
SSBP4-206ENST00000599699 UCMAQ8WVF2 138 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 PRICKLE1Q96MT3 831 aaPredicted RBP29.21■■■□□ 2.27
SSBP4-206ENST00000599699 NUP58Q9BVL2 599 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 EDEM3Q9BZQ6 932 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 CIPCQ9C0C6 399 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 POLMQ9NP87 494 aaPredicted RBP29.21■■■□□ 2.27
SSBP4-206ENST00000599699 HCN2Q9UL51 889 aa29.21■■■□□ 2.27
SSBP4-206ENST00000599699 MYO15AQ9UKN7 3530 aa29.2■■■□□ 2.27
SSBP4-206ENST00000599699 AXIN1O15169 862 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 ADAM23O75077 832 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 ALDH1A2O94788 518 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 CNR2P34972 360 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 FLT3P36888 993 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 RPS24P62847 133 aaKnown RBP29.2■■■□□ 2.26
SSBP4-206ENST00000599699 DEUP1Q05D60 604 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 SRSF5Q13243 272 aaKnown RBP29.2■■■□□ 2.26
SSBP4-206ENST00000599699 SLC25A52Q3SY17 297 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 ANO7Q6IWH7 933 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 PRR23BQ6ZRT6 265 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 MFN1Q8IWA4 741 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 CFAP52Q8N1V2 620 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 TBCBQ99426 244 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 ABCB8Q9NUT2 735 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 TMEM59LQ9UK28 342 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 RAB23Q9ULC3 237 aa29.2■■■□□ 2.26
SSBP4-206ENST00000599699 CCDC163A0A0D9SF12 145 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 F5H5T6 163 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 HRO43593 1189 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 CALB1P05937 261 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 TPM3P06753 285 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 HOXB2P14652 356 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 TFE3P19532 575 aaPredicted RBP29.19■■■□□ 2.26
SSBP4-206ENST00000599699 FIGNQ5HY92 759 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 CEP68Q76N32 757 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 PHF13Q86YI8 300 aaPredicted RBP29.19■■■□□ 2.26
SSBP4-206ENST00000599699 CARNMT1Q8N4J0 409 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 RNF214Q8ND24 703 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 MYEOVQ96EZ4 313 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 ACOX2Q99424 681 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 TTYH3Q9C0H2 523 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 EPC1Q9H2F5 836 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 WDCPQ9H6R7 721 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 PIGVQ9NUD9 493 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 ELOVL2Q9NXB9 296 aa29.19■■■□□ 2.26
SSBP4-206ENST00000599699 F9P00740 461 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 HLA-FP30511 346 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 MTA1Q13330 715 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 SIM2Q14190 667 aaPredicted RBP29.18■■■□□ 2.26
SSBP4-206ENST00000599699 OTUD1Q5VV17 481 aaPredicted RBP29.18■■■□□ 2.26
SSBP4-206ENST00000599699 EMC1Q8N766 993 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 ZNF557Q8N988 423 aaPredicted RBP29.18■■■□□ 2.26
SSBP4-206ENST00000599699 CFAP57Q96MR6 1250 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 CACNA2D2Q9NY47 1150 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 AIPL1Q9NZN9 384 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 CALCOCO1Q9P1Z2 691 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 BCCIPQ9P287 314 aaKnown RBP eCLIP29.18■■■□□ 2.26
SSBP4-206ENST00000599699 EBF1Q9UH73 591 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 GGA2Q9UJY4 613 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 SMG5Q9UPR3 1016 aaKnown RBP29.18■■■□□ 2.26
SSBP4-206ENST00000599699 PAXBP1Q9Y5B6 917 aa29.18■■■□□ 2.26
SSBP4-206ENST00000599699 FANCMQ8IYD8 2048 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms