RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 TMA16Q96EY4 203 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-219ENST00000599575 PDLIM2Q96JY6 352 aa17.16■□□□□ 0.34
SHKBP1-219ENST00000599575 COX16Q9P0S2 106 aa17.16■□□□□ 0.34
SHKBP1-219ENST00000599575 CALCOCO1Q9P1Z2 691 aa17.16■□□□□ 0.34
SHKBP1-219ENST00000599575 ANAPC7Q9UJX3 599 aa17.16■□□□□ 0.34
SHKBP1-219ENST00000599575 CUL9Q8IWT3 2517 aa17.16■□□□□ 0.34
SHKBP1-219ENST00000599575 OTOL1A6NHN0 477 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 BTNL10A8MVZ5 291 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 F5H5T6 163 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 TRDMT1O14717 391 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 CACNG3O60359 315 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 GJB6O95452 261 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 MOCS2O96007 188 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 TFE3P19532 575 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 MAN1A1P33908 653 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 ZNF135P52742 658 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 E2F5Q15329 346 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 CDO1Q16878 200 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 MS4A13Q5J8X5 152 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 RABGAP1LQ5R372 815 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 PIK3R6Q5UE93 754 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 RNF43Q68DV7 783 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 RAD9BQ6WBX8 426 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 DNAAF5Q86Y56 855 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 TMEM25Q86YD3 366 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 SIX5Q8N196 739 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 HJURPQ8NCD3 748 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 ARHGEF26Q96DR7 871 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 PRMT1Q99873 361 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 BBS2Q9BXC9 721 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 PACSIN1Q9BY11 444 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 ADAM33Q9BZ11 813 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 OSBPL2Q9H1P3 480 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 TRIOO75962 3097 aa17.15■□□□□ 0.34
SHKBP1-219ENST00000599575 KANSL1LA0AUZ9 987 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 KRBA1A5PL33 1030 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 NCAM2O15394 837 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 PAGE1O75459 146 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 TYRP14679 529 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 HTR7P34969 479 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 OGDHQ02218 1023 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 ANO4Q32M45 955 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 C5orf22Q49AR2 442 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 FYB2Q5VWT5 728 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 LRRC31Q6UY01 552 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 TPRG1Q6ZUI0 275 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 SLFN11Q7Z7L1 901 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 CHSY1Q86X52 802 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 FAM131BQ86XD5 332 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 CCDC117Q8IWD4 279 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 ETFBKMTQ8IXQ9 262 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 SYNPOQ8N3V7 929 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 SLC35G2Q8TBE7 412 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 DDI1Q8WTU0 396 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 FAM3CQ92520 227 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 C1QTNF1Q9BXJ1 281 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 DEC1Q9P2X7 70 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 FBXO10Q9UK96 956 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 CA14Q9ULX7 337 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 MYO10Q9HD67 2058 aa17.14■□□□□ 0.33
SHKBP1-219ENST00000599575 A0A0A0MRY4 1105 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 TMEM221A6NGB7 291 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 M0R296 226 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 SCAMP3O14828 347 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 PRPSAP2O60256 369 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 PROSCO94903 275 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 TACR2P21452 398 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 DRD1P21728 446 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 MAGEA9P43362 315 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 VAV2P52735 878 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 OXCT1P55809 520 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 GRSF1Q12849 480 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 FBXO43Q4G163 708 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 BOLA3Q53S33 107 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 EFHC2Q5JST6 749 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 SH3PXD2AQ5TCZ1 1133 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 NADSYN1Q6IA69 706 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 TPGS1Q6ZTW0 290 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 UBE2Q2Q8WVN8 375 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 CD101Q93033 1021 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 P2RY13Q9BPV8 354 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 MFSD1Q9H3U5 465 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 DONSONQ9NYP3 566 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 SLC27A6Q9Y2P4 619 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 HS3ST4Q9Y661 456 aa17.13■□□□□ 0.33
SHKBP1-219ENST00000599575 NEDD8-MDP1E9PL57 170 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 PJA2O43164 708 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 LRCH4O75427 683 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 GRIA2P42262 883 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 SLC1A1P43005 524 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 CLCN5P51795 746 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 ZNF252P-AS1Q0IIN9 211 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 AUHQ13825 339 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 HADHQ16836 314 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 GAB4Q2WGN9 574 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 TMEM196Q5HYL7 178 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 DGKKQ5KSL6 1271 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 PPP1R9BQ96SB3 815 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 PNKPQ96T60 521 aa17.12■□□□□ 0.33
SHKBP1-219ENST00000599575 IER2Q9BTL4 223 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms