RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ABCC13Q9NSE7 274 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 ABCB8Q9NUT2 735 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 PCOLCE2Q9UKZ9 415 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 HBS1LQ9Y450 684 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 ASPMQ8IZT6 3477 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 GOLGA8CPA6NN73 597 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 YJEFN3A6XGL0 299 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 E7ENQ6 273 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 CBFA2T3O75081 653 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 DNTTP04053 509 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 ATP5BP06576 529 aaKnown RBP11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 ZNF883P0CG24 379 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 VDRP11473 427 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 LCP1P13796 627 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 POLR2EP19388 210 aaKnown RBP11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 ACSL1P33121 698 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 ZNF445P59923 1031 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 MCCD1P59942 119 aaPredicted RBP11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 BNC1Q01954 994 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 CAMK2GQ13555 558 aaPredicted RBP11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 CUL2Q13617 745 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 TEAD4Q15561 434 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 CBWD6Q4V339 395 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 CBWD3Q5JTY5 395 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 CBWD5Q5RIA9 395 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 ADGRF1Q5T601 910 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 MBLAC2Q68D91 279 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 C19orf48Q6RUI8 117 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 CCNI2Q6ZMN8 369 aaPredicted RBP11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 BHLHA9Q7RTU4 235 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 GLRX5Q86SX6 157 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 AHI1Q8N157 1196 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 SCAND2PQ9GZW5 306 aaPredicted RBP11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 BTBD1Q9H0C5 482 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 PCED1AQ9H1Q7 454 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 GOLPH3LQ9H4A5 285 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 CCDC86Q9H6F5 360 aaKnown RBP11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 SUN2Q9UH99 717 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 FNDC3AQ9Y2H6 1198 aaKnown RBP11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 AKAP13Q12802 2813 aa11.01□□□□□ -0.65
CHMP2A-202ENST00000596708 GOLGA6L7A0A1B0GV03 622 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 A0A1W2PQ27 194 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 A0A1W2PQ64 194 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 PIK3R2O00459 728 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 FLRT2O43155 660 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 MSI1O43347 362 aaKnown RBP11□□□□□ -0.65
CHMP2A-202ENST00000596708 TBL1XO60907 577 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 FSBPO95073 299 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 SEMA4FO95754 770 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 LATS1O95835 1130 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 PABPC1P11940 636 aaKnown RBP11□□□□□ -0.65
CHMP2A-202ENST00000596708 PRCPP42785 496 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 RGS7P49802 495 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 AFF3P51826 1226 aaKnown RBP11□□□□□ -0.65
CHMP2A-202ENST00000596708 RPS14P62263 151 aaKnown RBP11□□□□□ -0.65
CHMP2A-202ENST00000596708 PNOCQ13519 176 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 ADIPOR2Q86V24 386 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 C1orf216Q8TAB5 229 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 GANCQ8TET4 914 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 KCTD13Q8WZ19 329 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 CDC6Q99741 560 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 TMEM245Q9H330 911 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 PRSS16Q9NQE7 514 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 CNGB3Q9NQW8 809 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 KIAA1522Q9P206 1035 aaPredicted RBP11□□□□□ -0.65
CHMP2A-202ENST00000596708 STIM2Q9P246 746 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 GGA2Q9UJY4 613 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 STOML2Q9UJZ1 356 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 WDR3Q9UNX4 943 aaKnown RBP eCLIP11□□□□□ -0.65
CHMP2A-202ENST00000596708 NCKAP1Q9Y2A7 1128 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 ZDHHC9Q9Y397 364 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 COQ4Q9Y3A0 265 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 ATP6V1DQ9Y5K8 247 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 SNX11Q9Y5W9 270 aa11□□□□□ -0.65
CHMP2A-202ENST00000596708 ASXL3Q9C0F0 2248 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 KCNK3O14649 394 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 CAPNS1P04632 268 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 DLDP09622 509 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 ATXN1LP0C7T5 689 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 SETSIPP0DME0 302 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 TBXAS1P24557 533 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 CD70P32970 193 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 SGSHP51688 502 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 DAOAP59103 153 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 ST8SIA6P61647 398 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 FKBP3Q00688 224 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 PTPRNQ16849 979 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 KIF19Q2TAC6 998 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 TTC31Q49AM3 519 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 CCDC157Q569K6 752 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 PIK3R6Q5UE93 754 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 ANKRD40Q6AI12 368 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 RFWD3Q6PCD5 774 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 TMEM270Q6UE05 265 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 DBX2Q6ZNG2 339 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 ADAT2Q7Z6V5 191 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 UNC45BQ8IWX7 931 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 MDM1Q8TC05 714 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 GOLGA1Q92805 767 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms