RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SERPINA13PQ6UXR4 307 aa24.4■■□□□ 1.5
LSM4-204ENST00000594828 CHST9Q7L1S5 443 aa24.4■■□□□ 1.5
LSM4-204ENST00000594828 METTL3Q86U44 580 aaKnown RBP24.4■■□□□ 1.5
LSM4-204ENST00000594828 TMPRSS6Q8IU80 811 aa24.4■■□□□ 1.5
LSM4-204ENST00000594828 FCRL2Q96LA5 508 aaPredicted RBP24.4■■□□□ 1.5
LSM4-204ENST00000594828 MKRN2Q9H000 416 aaKnown RBP24.4■■□□□ 1.5
LSM4-204ENST00000594828 CD93Q9NPY3 652 aa24.4■■□□□ 1.5
LSM4-204ENST00000594828 TMEM9BQ9NQ34 198 aa24.4■■□□□ 1.5
LSM4-204ENST00000594828 GGA2Q9UJY4 613 aa24.4■■□□□ 1.5
LSM4-204ENST00000594828 PLA2G4CQ9UP65 541 aa24.4■■□□□ 1.5
LSM4-204ENST00000594828 ATXN2Q99700 1313 aaKnown RBP24.39■■□□□ 1.5
LSM4-204ENST00000594828 NDUFS2O75306 463 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 EPHX1P07099 455 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 PRKCHP24723 683 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 HOXD12P35452 270 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 YWHAZP63104 245 aaKnown RBP24.39■■□□□ 1.49
LSM4-204ENST00000594828 PTK2Q05397 1052 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 LMAN2Q12907 356 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 PDCLQ13371 301 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 DAB2IPQ5VWQ8 1189 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 PEAR1Q5VY43 1037 aaPredicted RBP24.39■■□□□ 1.49
LSM4-204ENST00000594828 SMYD5Q6GMV2 418 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 SLC23A3Q6PIS1 610 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 KIAA0907Q7Z7F0 614 aaPredicted RBP24.39■■□□□ 1.49
LSM4-204ENST00000594828 AHI1Q8N157 1196 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.39■■□□□ 1.49
LSM4-204ENST00000594828 ADAM32Q8TC27 787 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 SLC39A13Q96H72 371 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 POPDC2Q9HBU9 364 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 DNAJC12Q9UKB3 198 aa24.39■■□□□ 1.49
LSM4-204ENST00000594828 CDX4O14627 284 aaPredicted RBP24.38■■□□□ 1.49
LSM4-204ENST00000594828 PABPC1P11940 636 aaKnown RBP24.38■■□□□ 1.49
LSM4-204ENST00000594828 PRKCSHP14314 528 aaPredicted RBP24.38■■□□□ 1.49
LSM4-204ENST00000594828 VWA3BQ502W6 1294 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 NADSYN1Q6IA69 706 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 TAC4Q86UU9 113 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 ADIPOR2Q86V24 386 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 WDTC1Q8N5D0 677 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 ZNF557Q8N988 423 aaPredicted RBP24.38■■□□□ 1.49
LSM4-204ENST00000594828 CEP76Q8TAP6 659 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 CYB5D2Q8WUJ1 264 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 SIPA1Q96FS4 1042 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 TUBGCP2Q9BSJ2 902 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 NDST4Q9H3R1 872 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 SIX2Q9NPC8 291 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 ITM2CQ9NQX7 267 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 STIM2Q9P246 746 aa24.38■■□□□ 1.49
LSM4-204ENST00000594828 TYW5A2RUC4 315 aaKnown RBP24.37■■□□□ 1.49
LSM4-204ENST00000594828 CD6P30203 668 aa24.37■■□□□ 1.49
LSM4-204ENST00000594828 DUOXA1Q1HG43 343 aa24.37■■□□□ 1.49
LSM4-204ENST00000594828 FNDC3BQ53EP0 1204 aaKnown RBP24.37■■□□□ 1.49
LSM4-204ENST00000594828 HSP90AA4PQ58FG1 418 aa24.37■■□□□ 1.49
LSM4-204ENST00000594828 MBLAC2Q68D91 279 aa24.37■■□□□ 1.49
LSM4-204ENST00000594828 SLC41A1Q8IVJ1 513 aa24.37■■□□□ 1.49
LSM4-204ENST00000594828 HJURPQ8NCD3 748 aaPredicted RBP24.37■■□□□ 1.49
LSM4-204ENST00000594828 WFDC5Q8TCV5 224 aa24.37■■□□□ 1.49
LSM4-204ENST00000594828 PRCCQ92733 491 aaPredicted RBP24.37■■□□□ 1.49
LSM4-204ENST00000594828 ZNF419Q96HQ0 510 aaPredicted RBP24.37■■□□□ 1.49
LSM4-204ENST00000594828 HSPA12BQ96MM6 686 aa24.37■■□□□ 1.49
LSM4-204ENST00000594828 AJAP1Q9UKB5 411 aaPredicted RBP24.37■■□□□ 1.49
LSM4-204ENST00000594828 PCDHGC3Q9UN70 934 aa24.37■■□□□ 1.49
LSM4-204ENST00000594828 TNRC6BQ9UPQ9 1833 aaKnown RBP24.37■■□□□ 1.49
LSM4-204ENST00000594828 FOXN3O00409 490 aaPredicted RBP24.36■■□□□ 1.49
LSM4-204ENST00000594828 KCNK5O95279 499 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 TRUB2O95900 331 aaKnown RBP24.36■■□□□ 1.49
LSM4-204ENST00000594828 CFIP05156 583 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 ATP5BP06576 529 aaKnown RBP24.36■■□□□ 1.49
LSM4-204ENST00000594828 HLA-EP13747 358 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 CD70P32970 193 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 COPAP53621 1224 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 CLEC17AQ6ZS10 378 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 PASD1Q8IV76 773 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 MFN1Q8IWA4 741 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 PPP1R13BQ96KQ4 1090 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 LHX5Q9H2C1 402 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 TMEM245Q9H330 911 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 USP36Q9P275 1121 aaKnown RBP24.36■■□□□ 1.49
LSM4-204ENST00000594828 TJP2Q9UDY2 1190 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 SLC6A14Q9UN76 642 aa24.36■■□□□ 1.49
LSM4-204ENST00000594828 CEP192Q8TEP8 1941 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 MOCS2O96007 188 aaPredicted RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 APOEP02649 317 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 DLDP09622 509 aaKnown RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 ACADMP11310 421 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 POLR2EP19388 210 aaKnown RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 KRT9P35527 623 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 TPMTP51580 245 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 RPS24P62847 133 aaKnown RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 TAF5Q15542 800 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 PTPRNQ16849 979 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 DCAF6Q58WW2 860 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 ZC3H12AQ5D1E8 599 aaKnown RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 MS4A13Q5J8X5 152 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 CT47A1Q5JQC4 288 aaPredicted RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 MIIPQ5JXC2 388 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 RABEPKQ7Z6M1 372 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 CCDC117Q8IWD4 279 aaPredicted RBP24.35■■□□□ 1.49
LSM4-204ENST00000594828 RGL4Q8IZJ4 473 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 FIBINQ8TAL6 211 aa24.35■■□□□ 1.49
LSM4-204ENST00000594828 FOXJ1Q92949 421 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms