RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 MSANTD2Q6P1R3 559 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 CCNI2Q6ZMN8 369 aaPredicted RBP16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 PNPLA1Q8N8W4 532 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 UBA3Q8TBC4 463 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 BAHD1Q8TBE0 780 aaPredicted RBP16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 EDEM1Q92611 657 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 LMLNQ96KR4 655 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 MIR1-1HGQ9H1L0 117 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 GAREM1Q9H706 876 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 CNGB3Q9NQW8 809 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 KIAA1257Q9ULG3 409 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 FNDC3AQ9Y2H6 1198 aaKnown RBP16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 PCDHB9Q9Y5E1 797 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 PCDHGB2Q9Y5G2 931 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 BAHCC1Q9P281 2608 aa16.59■□□□□ 0.25
GTF2F1-203ENST00000594213 APC2O95996 2303 aa16.58■□□□□ 0.25
GTF2F1-203ENST00000594213 DKK1O94907 266 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 IGLV3-27P01718 113 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 SETSIPP0DME0 302 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 ACSL1P33121 698 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 SGSHP51688 502 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 DAOAP59103 153 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 FKBP3Q00688 224 aaKnown RBP16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 RING1Q06587 406 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 PNOCQ13519 176 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 HLA-BQ31612 363 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 MPP7Q5T2T1 576 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 ANKRD40Q6AI12 368 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 IL27RAQ6UWB1 636 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 LRSAM1Q6UWE0 723 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 LCLAT1Q6UWP7 414 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 CHST9Q7L1S5 443 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 PROSER1Q86XN7 944 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 SPATA20Q8TB22 786 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 WFDC5Q8TCV5 224 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 RNF139Q8WU17 664 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 CYB5D2Q8WUJ1 264 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 SLC35F5Q8WV83 523 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 TFAP2BQ92481 460 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 SLC35C1Q96A29 364 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 ZSWIM1Q9BR11 485 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 LHX5Q9H2C1 402 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 C6orf106Q9H6K1 298 aaPredicted RBP16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 OSGEPQ9NPF4 335 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 PRSS16Q9NQE7 514 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 TM7SF3Q9NS93 570 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 ABCC13Q9NSE7 274 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 ABCB8Q9NUT2 735 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 KIAA1522Q9P206 1035 aaPredicted RBP16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 HESX1Q9UBX0 185 aa16.58■□□□□ 0.24
GTF2F1-203ENST00000594213 A0A1B0GVT2 93 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 MSI1O43347 362 aaKnown RBP16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 CER1O95813 267 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 PABPC1P11940 636 aaKnown RBP16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 CD19P15391 556 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 MATKP42679 507 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 RPS14P62263 151 aaKnown RBP16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 SCAPQ12770 1279 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 PIK3R6Q5UE93 754 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 TCERG1LQ5VWI1 586 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 FAM124AQ86V42 546 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 CACUL1Q86Y37 369 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 FMR1NBQ8N0W7 255 aaPredicted RBP16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 IPO9Q96P70 1041 aaKnown RBP16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 IRX2Q9BZI1 471 aaPredicted RBP16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 TOR4AQ9NXH8 423 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 GGA2Q9UJY4 613 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 PLA2G4CQ9UP65 541 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 CKAP5Q14008 2032 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 CELSR3Q9NYQ7 3312 aa16.57■□□□□ 0.24
GTF2F1-203ENST00000594213 RNF225M0QZC1 329 aaPredicted RBP16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 PMM2O15305 246 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 PAEPP09466 180 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 DLDP09622 509 aaKnown RBP16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 CSNK1EP49674 416 aaKnown RBP16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 YWHAEP62258 255 aaKnown RBP16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 ARID5AQ03989 594 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 ZBTB16Q05516 673 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 NUMA1Q14980 2115 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 CNGA2Q16280 664 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 KIF19Q2TAC6 998 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 FNDC3BQ53EP0 1204 aaKnown RBP16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 FAM133BQ5BKY9 247 aaKnown RBP16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 DCAF17Q5H9S7 520 aaPredicted RBP16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 ZNF658Q5TYW1 1059 aaPredicted RBP16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 MBLAC2Q68D91 279 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 PMF1Q6P1K2 205 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 AHI1Q8N157 1196 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 ZNF366Q8N895 744 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 IRGQQ8WZA9 623 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 AZIN2Q96A70 460 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 GSDMAQ96QA5 445 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 ORAI3Q9BRQ5 295 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 FBRSQ9HAH7 460 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 GDPD2Q9HCC8 539 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 APOBEC2Q9Y235 224 aaKnown RBP16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 ACACAQ13085 2346 aa16.56■□□□□ 0.24
GTF2F1-203ENST00000594213 GOLGA6L7A0A1B0GV03 622 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms