RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 TBCBQ99426 244 aa15.1■□□□□ 0.01
VRK3-206ENST00000594090 PHOX2BQ99453 314 aa15.1■□□□□ 0.01
VRK3-206ENST00000594090 FAM126AQ9BYI3 521 aaPredicted RBP15.1■□□□□ 0.01
VRK3-206ENST00000594090 SLC2A11Q9BYW1 496 aa15.1■□□□□ 0.01
VRK3-206ENST00000594090 PIGVQ9NUD9 493 aa15.1■□□□□ 0.01
VRK3-206ENST00000594090 POLR3BQ9NW08 1133 aaPredicted RBP15.1■□□□□ 0.01
VRK3-206ENST00000594090 CLEC4EQ9ULY5 219 aa15.1■□□□□ 0.01
VRK3-206ENST00000594090 SLC27A6Q9Y2P4 619 aa15.1■□□□□ 0.01
VRK3-206ENST00000594090 ATG2BQ96BY7 2078 aa15.1■□□□□ 0.01
VRK3-206ENST00000594090 GJB6O95452 261 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 SKILP12757 684 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 ABCB4P21439 1286 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 HOXC13P31276 330 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 ZBED6P86452 979 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 DMC1Q14565 340 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 HSF5Q4G112 596 aaPredicted RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 MS4A13Q5J8X5 152 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 MPP7Q5T2T1 576 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 RNF43Q68DV7 783 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 ACAD10Q6JQN1 1059 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 ZC3H14Q6PJT7 736 aaKnown RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 BNIPLQ7Z465 357 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 ANKS1BQ7Z6G8 1248 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 CHSY1Q86X52 802 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 ALLCQ8N6M5 410 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 EMC1Q8N766 993 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 ZNF513Q8N8E2 541 aaPredicted RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 IL17RCQ8NAC3 791 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 HJURPQ8NCD3 748 aaPredicted RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 ZBTB44Q8NCP5 570 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 C3orf20Q8ND61 904 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 KCNV2Q8TDN2 545 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 CPLX3Q8WVH0 158 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 SYN2Q92777 582 aaPredicted RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 MYEOVQ96EZ4 313 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 CFAP57Q96MR6 1250 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 PRMT1Q99873 361 aaKnown RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 ZSCAN32Q9NX65 697 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 TAS2R14Q9NYV8 317 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 SLC12A6Q9UHW9 1150 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 MMP17Q9ULZ9 603 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 SLC8A2Q9UPR5 921 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 STARD13Q9Y3M8 1113 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 R4GN57 208 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 TYW5A2RUC4 315 aaKnown RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 TBL1XO60907 577 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 KLF8O95600 359 aaPredicted RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 TACR2P21452 398 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 CXCR3P49682 368 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 NRLP54845 237 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 RPS24P62847 133 aaKnown RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 DEUP1Q05D60 604 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 DMWDQ09019 674 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 MTA1Q13330 715 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 GEN1Q17RS7 908 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 TDRD12Q587J7 1177 aaKnown RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 BRMS1LQ5PSV4 323 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 HGSNATQ68CP4 663 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 PPP1R2P3Q6NXS1 205 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 MCOLN2Q8IZK6 566 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 LGI2Q8N0V4 545 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 CCDC33Q8N5R6 958 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 TXNDC5Q8NBS9 432 aaKnown RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 JOSD2Q8TAC2 188 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 HHIPQ96QV1 700 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 SELENOOQ9BVL4 669 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 ZDHHC4Q9NPG8 344 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 HCN2Q9UL51 889 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 LUC7L2Q9Y383 392 aaKnown RBP15.09■□□□□ 0.01
VRK3-206ENST00000594090 PCDHGA2Q9Y5H1 932 aa15.09■□□□□ 0.01
VRK3-206ENST00000594090 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.09■□□□□ 0.01
VRK3-206ENST00000594090 TCRBV5S1A1TA0A578 114 aa15.08■□□□□ 0
VRK3-206ENST00000594090 C2CD4BA6NLJ0 364 aa15.08■□□□□ 0
VRK3-206ENST00000594090 PROB1E7EW31 1015 aa15.08■□□□□ 0
VRK3-206ENST00000594090 SGK1O00141 431 aa15.08■□□□□ 0
VRK3-206ENST00000594090 DDX3XO00571 662 aaKnown RBP eCLIP15.08■□□□□ 03e-12■■□□□ 11.9
VRK3-206ENST00000594090 ADCY5O95622 1261 aa15.08■□□□□ 0
VRK3-206ENST00000594090 F9P00740 461 aa15.08■□□□□ 0
VRK3-206ENST00000594090 KRT3P12035 628 aa15.08■□□□□ 0
VRK3-206ENST00000594090 HLA-FP30511 346 aa15.08■□□□□ 0
VRK3-206ENST00000594090 HOXA6P31267 233 aa15.08■□□□□ 0
VRK3-206ENST00000594090 CASP14P31944 242 aa15.08■□□□□ 0
VRK3-206ENST00000594090 ATXN1P54253 815 aaKnown RBP15.08■□□□□ 0
VRK3-206ENST00000594090 TRIM14Q14142 442 aa15.08■□□□□ 0
VRK3-206ENST00000594090 EGFLAMQ63HQ2 1017 aa15.08■□□□□ 0
VRK3-206ENST00000594090 SPECC1LQ69YQ0 1117 aa15.08■□□□□ 0
VRK3-206ENST00000594090 DNAJC24Q6P3W2 148 aa15.08■□□□□ 0
VRK3-206ENST00000594090 SND1Q7KZF4 910 aaKnown RBP eCLIP15.08■□□□□ 0
VRK3-206ENST00000594090 TRMT11Q7Z4G4 463 aaKnown RBP15.08■□□□□ 0
VRK3-206ENST00000594090 WFDC5Q8TCV5 224 aa15.08■□□□□ 0
VRK3-206ENST00000594090 RXFP2Q8WXD0 754 aa15.08■□□□□ 0
VRK3-206ENST00000594090 TKTL2Q9H0I9 626 aa15.08■□□□□ 0
VRK3-206ENST00000594090 ANLNQ9NQW6 1124 aa15.08■□□□□ 0
VRK3-206ENST00000594090 TMEM51Q9NW97 253 aa15.08■□□□□ 0
VRK3-206ENST00000594090 ARHGEF38Q9NXL2 777 aa15.08■□□□□ 0
VRK3-206ENST00000594090 STIM2Q9P246 746 aa15.08■□□□□ 0
VRK3-206ENST00000594090 PAXBP1Q9Y5B6 917 aa15.08■□□□□ 0
VRK3-206ENST00000594090 BZW2Q9Y6E2 419 aaKnown RBP15.08■□□□□ 0
VRK3-206ENST00000594090 TMCO5BA8MYB1 307 aa15.07■□□□□ 0
VRK3-206ENST00000594090 F5H5T6 163 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms