RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 UBXN6Q9BZV1 441 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 IL21RQ9HBE5 538 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 LRRC4Q9HBW1 653 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 TM7SF3Q9NS93 570 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 RAB20Q9NX57 234 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 HESX1Q9UBX0 185 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 HOOK1Q9UJC3 728 aaKnown RBP15.39■□□□□ 0.05
PNKP-202ENST00000593706 PCOLCE2Q9UKZ9 415 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 MYLKQ15746 1914 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 GCN1Q92616 2671 aaKnown RBP15.39■□□□□ 0.05
PNKP-202ENST00000593706 BPTFQ12830 3046 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 CETN3O15182 167 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 TIMM44O43615 452 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 IGLV3-19P01714 112 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 ZNF883P0CG24 379 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 HOXD9P28356 352 aaPredicted RBP15.38■□□□□ 0.05
PNKP-202ENST00000593706 ADIGQ0VDE8 80 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 SCAPQ12770 1279 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 DCAF17Q5H9S7 520 aaPredicted RBP15.38■□□□□ 0.05
PNKP-202ENST00000593706 TMEM215Q68D42 235 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 FOXR2Q6PJQ5 311 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 LRSAM1Q6UWE0 723 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 FAM217AQ8IXS0 508 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 SIX6OS1Q8N1H7 587 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 ZNF366Q8N895 744 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 OR2T3Q8NH03 318 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 WFIKKN2Q8TEU8 576 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 FAXDC2Q96IV6 333 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 LHX5Q9H2C1 402 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 CHMP5Q9NZZ3 219 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 TSPAN16Q9UKR8 245 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 PLA2G4CQ9UP65 541 aa15.38■□□□□ 0.05
PNKP-202ENST00000593706 FNDC3AQ9Y2H6 1198 aaKnown RBP15.38■□□□□ 0.05
PNKP-202ENST00000593706 PPP1R3GB7ZBB8 358 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 TULP2O00295 520 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 XPO1O14980 1071 aaKnown RBP15.37■□□□□ 0.05
PNKP-202ENST00000593706 FLRT2O43155 660 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 CD19P15391 556 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 HLA-FP30511 346 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 AFF3P51826 1226 aaKnown RBP15.37■□□□□ 0.05
PNKP-202ENST00000593706 ZNF445P59923 1031 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 FKBP3Q00688 224 aaKnown RBP15.37■□□□□ 0.05
PNKP-202ENST00000593706 PDE4CQ08493 712 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 BST2Q10589 180 aaKnown RBP15.37■□□□□ 0.05
PNKP-202ENST00000593706 TRIP4Q15650 581 aaPredicted RBP15.37■□□□□ 0.05
PNKP-202ENST00000593706 HLA-BQ31612 363 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 CBWD6Q4V339 395 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 SGO2Q562F6 1265 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 CBWD3Q5JTY5 395 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 CBWD5Q5RIA9 395 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 TTI2Q6NXR4 508 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 CHST9Q7L1S5 443 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 CYB5D2Q8WUJ1 264 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 NDRG1Q92597 394 aaKnown RBP15.37■□□□□ 0.05
PNKP-202ENST00000593706 EDEM1Q92611 657 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 SLC35C1Q96A29 364 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 DHTKD1Q96HY7 919 aaPredicted RBP15.37■□□□□ 0.05
PNKP-202ENST00000593706 PCED1AQ9H1Q7 454 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 CCDC86Q9H6F5 360 aaKnown RBP15.37■□□□□ 0.05
PNKP-202ENST00000593706 ABCB8Q9NUT2 735 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 COQ4Q9Y3A0 265 aa15.37■□□□□ 0.05
PNKP-202ENST00000593706 HBS1LQ9Y450 684 aaKnown RBP15.37■□□□□ 0.05
PNKP-202ENST00000593706 A0A1B0GVT2 93 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 CBFA2T3O75081 653 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 CSNK1EP49674 416 aaKnown RBP15.36■□□□□ 0.05
PNKP-202ENST00000593706 UBE2HP62256 183 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 YWHAEP62258 255 aaKnown RBP15.36■□□□□ 0.05
PNKP-202ENST00000593706 CAMK2GQ13555 558 aaPredicted RBP15.36■□□□□ 0.05
PNKP-202ENST00000593706 TEAD4Q15561 434 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 PM20D1Q6GTS8 502 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 GLRX5Q86SX6 157 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 AHI1Q8N157 1196 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 RBBP8NLQ8NC74 664 aaPredicted RBP15.36■□□□□ 0.05
PNKP-202ENST00000593706 RHBDD1Q8TEB9 315 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 TATDN2Q93075 761 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 TSG101Q99816 390 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 C6orf106Q9H6K1 298 aaPredicted RBP15.36■□□□□ 0.05
PNKP-202ENST00000593706 SFMBT1Q9UHJ3 866 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 GGA2Q9UJY4 613 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 URB1O60287 2271 aaKnown RBP15.36■□□□□ 0.05
PNKP-202ENST00000593706 COL5A1P20908 1838 aaPredicted RBP15.36■□□□□ 0.05
PNKP-202ENST00000593706 DOCK9Q9BZ29 2069 aa15.36■□□□□ 0.05
PNKP-202ENST00000593706 SHROOM3Q8TF72 1996 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 GOLGA8CPA6NN73 597 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 TAF4O00268 1085 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 PSMA7O14818 248 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 MSI1O43347 362 aaKnown RBP15.35■□□□□ 0.05
PNKP-202ENST00000593706 SEMA4FO95754 770 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 LATS1O95835 1130 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 DNTTP04053 509 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 ACSL1P33121 698 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 BNC1Q01954 994 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 CUL2Q13617 745 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 TTC31Q49AM3 519 aaPredicted RBP15.35■□□□□ 0.05
PNKP-202ENST00000593706 ADGRF1Q5T601 910 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 BSPRYQ5W0U4 402 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 ISM2Q6H9L7 571 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 CCNI2Q6ZMN8 369 aaPredicted RBP15.35■□□□□ 0.05
PNKP-202ENST00000593706 BHLHA9Q7RTU4 235 aa15.35■□□□□ 0.05
PNKP-202ENST00000593706 SLCO6A1Q86UG4 719 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms