RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 METTL14Q9HCE5 456 aaKnown RBP24.94■■□□□ 1.58
LSM4-202ENST00000593564 SPEGQ15772 3267 aa24.94■■□□□ 1.58
LSM4-202ENST00000593564 PMM2O15305 246 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 BCAT2O15382 392 aaPredicted RBP24.93■■□□□ 1.58
LSM4-202ENST00000593564 MSI1O43347 362 aaKnown RBP24.93■■□□□ 1.58
LSM4-202ENST00000593564 HLA-EP13747 358 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 FMO5P49326 533 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 TRIP6Q15654 476 aaKnown RBP24.93■■□□□ 1.58
LSM4-202ENST00000593564 TMEM270Q6UE05 265 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 RAB44Q7Z6P3 723 aaPredicted RBP24.93■■□□□ 1.58
LSM4-202ENST00000593564 KIAA0907Q7Z7F0 614 aaPredicted RBP24.93■■□□□ 1.58
LSM4-202ENST00000593564 CACUL1Q86Y37 369 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 NAXDQ8IW45 347 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 SLC35F5Q8WV83 523 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 ZCCHC14Q8WYQ9 949 aaKnown RBP24.93■■□□□ 1.58
LSM4-202ENST00000593564 IRGQQ8WZA9 623 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 TFAP2BQ92481 460 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 ABCB8Q9NUT2 735 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 PLA2G4CQ9UP65 541 aa24.93■■□□□ 1.58
LSM4-202ENST00000593564 GOLGA6L4A6NEF3 574 aa24.92■■□□□ 1.58
LSM4-202ENST00000593564 IGLV3-27P01718 113 aa24.92■■□□□ 1.58
LSM4-202ENST00000593564 LCP1P13796 627 aa24.92■■□□□ 1.58
LSM4-202ENST00000593564 FNDC3BQ53EP0 1204 aaKnown RBP24.92■■□□□ 1.58
LSM4-202ENST00000593564 CHST9Q7L1S5 443 aa24.92■■□□□ 1.58
LSM4-202ENST00000593564 ADIPOR2Q86V24 386 aa24.92■■□□□ 1.58
LSM4-202ENST00000593564 AHI1Q8N157 1196 aa24.92■■□□□ 1.58
LSM4-202ENST00000593564 CHCHD4Q8N4Q1 142 aa24.92■■□□□ 1.58
LSM4-202ENST00000593564 ERCC4Q92889 916 aaPredicted RBP24.92■■□□□ 1.58
LSM4-202ENST00000593564 NT5C1BQ96P26 610 aa24.92■■□□□ 1.58
LSM4-202ENST00000593564 IRX2Q9BZI1 471 aaPredicted RBP24.92■■□□□ 1.58
LSM4-202ENST00000593564 GGA2Q9UJY4 613 aa24.92■■□□□ 1.58
LSM4-202ENST00000593564 PCDHB9Q9Y5E1 797 aa24.92■■□□□ 1.58
LSM4-202ENST00000593564 PKD1L2Q7Z442 2459 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 PSMA7O14818 248 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 GABBR2O75899 941 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 PABPC1P11940 636 aaKnown RBP24.91■■□□□ 1.58
LSM4-202ENST00000593564 STILQ15468 1287 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 MPP7Q5T2T1 576 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 PMF1Q6P1K2 205 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 C1orf216Q8TAB5 229 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 CYB5D2Q8WUJ1 264 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 CEP63Q96MT8 703 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 LHX5Q9H2C1 402 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 FBRSQ9HAH7 460 aa24.91■■□□□ 1.58
LSM4-202ENST00000593564 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.91■■□□□ 1.58
LSM4-202ENST00000593564 ZNF883P0CG24 379 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 RGS7P49802 495 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 SGSHP51688 502 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 STIM1Q13586 685 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 CNGA2Q16280 664 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 PTPRNQ16849 979 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 NUGGCQ68CJ6 796 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 IL27RAQ6UWB1 636 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 FAM124AQ86V42 546 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 UNC45BQ8IWX7 931 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 DHTKD1Q96HY7 919 aaPredicted RBP24.9■■□□□ 1.58
LSM4-202ENST00000593564 TIGD1Q96MW7 591 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 ZSWIM1Q9BR11 485 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 EIF2B4Q9UI10 523 aaKnown RBP24.9■■□□□ 1.58
LSM4-202ENST00000593564 HOOK1Q9UJC3 728 aaKnown RBP24.9■■□□□ 1.58
LSM4-202ENST00000593564 RALYQ9UKM9 306 aaKnown RBP24.9■■□□□ 1.58
LSM4-202ENST00000593564 PCDHB4Q9Y5E5 795 aa24.9■■□□□ 1.58
LSM4-202ENST00000593564 ZFYVE26Q68DK2 2539 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 DMXL2Q8TDJ6 3036 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 SRRM3A6NNA2 597 aaPredicted RBP24.89■■□□□ 1.58
LSM4-202ENST00000593564 M0QYV0 167 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 CBFA2T3O75081 653 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 CER1O95813 267 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 DLDP09622 509 aaKnown RBP24.89■■□□□ 1.58
LSM4-202ENST00000593564 SLC11A2P49281 568 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 RING1Q06587 406 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 PIK3R6Q5UE93 754 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 MBLAC2Q68D91 279 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 PPM1KQ8N3J5 372 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 HSFY1Q96LI6 401 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 GAREM1Q9H706 876 aa24.89■■□□□ 1.58
LSM4-202ENST00000593564 MUC22E2RYF6 1773 aaPredicted RBP24.89■■□□□ 1.57
LSM4-202ENST00000593564 IRAK2O43187 625 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 LTFP02788 710 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 ATP5BP06576 529 aaKnown RBP24.88■■□□□ 1.57
LSM4-202ENST00000593564 FTH1P19P0C7X4 201 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 MATKP42679 507 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 BNC1Q01954 994 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 ZBTB16Q05516 673 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 FAM133BQ5BKY9 247 aaKnown RBP24.88■■□□□ 1.57
LSM4-202ENST00000593564 RFWD3Q6PCD5 774 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 GLRX5Q86SX6 157 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 ZNF366Q8N895 744 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 ZNF557Q8N988 423 aaPredicted RBP24.88■■□□□ 1.57
LSM4-202ENST00000593564 WFDC5Q8TCV5 224 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 ADAMTS14Q8WXS8 1223 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 AZIN2Q96A70 460 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 C6orf106Q9H6K1 298 aaPredicted RBP24.88■■□□□ 1.57
LSM4-202ENST00000593564 IL21RQ9HBE5 538 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 PCOLCE2Q9UKZ9 415 aa24.88■■□□□ 1.57
LSM4-202ENST00000593564 RNF225M0QZC1 329 aaPredicted RBP24.87■■□□□ 1.57
LSM4-202ENST00000593564 PIK3R2O00459 728 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 P4HA2O15460 535 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 ACSL4O60488 711 aa24.87■■□□□ 1.57
LSM4-202ENST00000593564 TBL1XO60907 577 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms