RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TCRBV21S2A2A0A5A6 115 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 CALCAP01258 141 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 CFIP05156 583 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 LCP1P13796 627 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 HOXB2P14652 356 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 RGS7P49802 495 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 ATXN3P54252 364 aaPredicted RBP13.78□□□□□ -0.2
H3F3B-213ENST00000593254 GFPT1Q06210 699 aaPredicted RBP13.78□□□□□ -0.2
H3F3B-213ENST00000593254 BYSLQ13895 437 aaKnown RBP13.78□□□□□ -0.2
H3F3B-213ENST00000593254 CCNI2Q6ZMN8 369 aaPredicted RBP13.78□□□□□ -0.2
H3F3B-213ENST00000593254 RNF139Q8WU17 664 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 HMGB4Q8WW32 186 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 ADAMTS14Q8WXS8 1223 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 IRGQQ8WZA9 623 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 EDEM1Q92611 657 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 HSFY1Q96LI6 401 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 ACOX2Q99424 681 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 GABRG3Q99928 467 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 CD248Q9HCU0 757 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 DNAAF2Q9NVR5 837 aaKnown RBP13.78□□□□□ -0.2
H3F3B-213ENST00000593254 BCCIPQ9P287 314 aaKnown RBP eCLIP13.78□□□□□ -0.2
H3F3B-213ENST00000593254 HBS1LQ9Y450 684 aaKnown RBP13.78□□□□□ -0.2
H3F3B-213ENST00000593254 KNL1Q8NG31 2342 aa13.78□□□□□ -0.2
H3F3B-213ENST00000593254 TENM4Q6N022 2769 aa13.77□□□□□ -0.2
H3F3B-213ENST00000593254 A0A1W2PQF6 199 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 GJB3O75712 270 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 GABRG2P18507 467 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 RPL34P49207 117 aaKnown RBP13.77□□□□□ -0.21
H3F3B-213ENST00000593254 MFAP3P55082 362 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 MEA1Q16626 185 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 MSANTD2Q6P1R3 559 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 TRIM65Q6PJ69 517 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 NAV2Q8IVL1 2488 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 CHPFQ8IZ52 775 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 MINDY1Q8N5J2 469 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 MLKLQ8NB16 471 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 GTPBP2Q9BX10 602 aaKnown RBP13.77□□□□□ -0.21
H3F3B-213ENST00000593254 CLSTN2Q9H4D0 955 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 SFMBT1Q9UHJ3 866 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 STOML2Q9UJZ1 356 aa13.77□□□□□ -0.21
H3F3B-213ENST00000593254 GFRA2O00451 464 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 PIK3R2O00459 728 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 ARHGAP33O14559 1287 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 AP5Z1O43299 807 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 FBXO21O94952 628 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 LATS1O95835 1130 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 LTFP02788 710 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 CYBBP04839 570 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 WASP42768 502 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 GPD2P43304 727 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 HARS2P49590 506 aaKnown RBP13.76□□□□□ -0.21
H3F3B-213ENST00000593254 SLC14A1Q13336 389 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 TRIP6Q15654 476 aaKnown RBP13.76□□□□□ -0.21
H3F3B-213ENST00000593254 RABEPKQ7Z6M1 372 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 OR2I1PQ8NGU4 316 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 IPO4Q8TEX9 1081 aaKnown RBP13.76□□□□□ -0.21
H3F3B-213ENST00000593254 CLEC4CQ8WTT0 213 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 PIWIL1Q96J94 861 aaKnown RBP13.76□□□□□ -0.21
H3F3B-213ENST00000593254 CRACR2AQ9BSW2 395 aa13.76□□□□□ -0.21
H3F3B-213ENST00000593254 CCDC86Q9H6F5 360 aaKnown RBP13.76□□□□□ -0.21
H3F3B-213ENST00000593254 UBE2TQ9NPD8 197 aaPredicted RBP13.76□□□□□ -0.21
H3F3B-213ENST00000593254 CABIN1Q9Y6J0 2220 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 GTPBP10A4D1E9 387 aaKnown RBP13.75□□□□□ -0.21
H3F3B-213ENST00000593254 MSI1O43347 362 aaKnown RBP13.75□□□□□ -0.21
H3F3B-213ENST00000593254 SH3BP5O60239 455 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 IGLV3-27P01718 113 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 FTH1P19P0C7X4 201 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 KRT5P13647 590 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 ZNF445P59923 1031 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 RPL6Q02878 288 aaKnown RBP13.75□□□□□ -0.21
H3F3B-213ENST00000593254 GEN1Q17RS7 908 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 SDE2Q6IQ49 451 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 ENOSF1Q7L5Y1 443 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 ANKS1BQ7Z6G8 1248 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 PGBD3Q8N328 593 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 DDI1Q8WTU0 396 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 FAM81BQ96LP2 452 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 CAMK1GQ96NX5 476 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 SLC2A11Q9BYW1 496 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 SCUBE2Q9NQ36 999 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 CACNA2D2Q9NY47 1150 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 CALCOCO1Q9P1Z2 691 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 CLEC4EQ9ULY5 219 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 KNTC1P50748 2209 aa13.75□□□□□ -0.21
H3F3B-213ENST00000593254 MUC22E2RYF6 1773 aaPredicted RBP13.74□□□□□ -0.21
H3F3B-213ENST00000593254 WASH3PC4AMC7 463 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 NPC1O15118 1278 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 FYNP06241 537 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 NDUFV2P19404 249 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 SLC9A1P19634 815 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 HOXD9P28356 352 aaPredicted RBP13.74□□□□□ -0.21
H3F3B-213ENST00000593254 ZNF33AQ06730 810 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 ENPP2Q13822 863 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 EIF4HQ15056 248 aaKnown RBP13.74□□□□□ -0.21
H3F3B-213ENST00000593254 EXOC3L4Q17RC7 722 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 MPPE1Q53F39 396 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 ADGRF1Q5T601 910 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 GJB7Q6PEY0 223 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 SLC36A4Q6YBV0 504 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms