RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 KREMEN2Q8NCW0 462 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 CCDC26Q8TAB7 109 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 ADAM32Q8TC27 787 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 CASP10Q92851 521 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 MAGOHBQ96A72 148 aaKnown RBP13.96□□□□□ -0.17
VMP1-217ENST00000593168 FAF2Q96CS3 445 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 SERPINB11Q96P15 392 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 CDK5RAP1Q96SZ6 601 aaKnown RBP13.96□□□□□ -0.17
VMP1-217ENST00000593168 LRRC1Q9BTT6 524 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 CALN1Q9BXU9 219 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 MAK16Q9BXY0 300 aaKnown RBP13.96□□□□□ -0.17
VMP1-217ENST00000593168 DDX47Q9H0S4 455 aaKnown RBP13.96□□□□□ -0.17
VMP1-217ENST00000593168 DHX35Q9H5Z1 703 aaKnown RBP13.96□□□□□ -0.17
VMP1-217ENST00000593168 WDCPQ9H6R7 721 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 PRDM16Q9HAZ2 1276 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 GPATCH2LQ9NWQ4 482 aa13.96□□□□□ -0.17
VMP1-217ENST00000593168 MAGED2Q9UNF1 606 aaPredicted RBP13.96□□□□□ -0.17
VMP1-217ENST00000593168 MYO16Q9Y6X6 1858 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 SYNJ2BP-COX16A0A087WUM0 186 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 DYNC1I1O14576 645 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 GLUD1P00367 558 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 CCR1P32246 355 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 FNTAP49354 379 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 ZNF135P52742 658 aaPredicted RBP13.95□□□□□ -0.18
VMP1-217ENST00000593168 ADCY2Q08462 1091 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 PPP2R5DQ14738 602 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 ELF2Q15723 593 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 TAF12Q16514 161 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 EFHC2Q5JST6 749 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 KAZNQ674X7 775 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 C8orf74Q6P047 294 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 MAATS1Q7Z4T9 603 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 DNAJB7Q7Z6W7 309 aaPredicted RBP13.95□□□□□ -0.18
VMP1-217ENST00000593168 TADA2BQ86TJ2 420 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 TMEM105Q8N8V8 129 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 TTC13Q8NBP0 860 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 TSC1Q92574 1164 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 PSMG2Q969U7 264 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 RNF157Q96PX1 679 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 FRMD8P1Q9BZ68 369 aaPredicted RBP13.95□□□□□ -0.18
VMP1-217ENST00000593168 DCLK3Q9C098 648 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 ANKZF1Q9H8Y5 726 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 ARHGEF38Q9NXL2 777 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 COX16Q9P0S2 106 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 UXTQ9UBK9 157 aaPredicted RBP13.95□□□□□ -0.18
VMP1-217ENST00000593168 PCYOX1Q9UHG3 505 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 SFMBT1Q9UHJ3 866 aa13.95□□□□□ -0.18
VMP1-217ENST00000593168 SPTBN4Q9H254 2564 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 ZNF840PA6NDX5 716 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 C2CD4DB7Z1M9 353 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 CST8O60676 142 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 RHOXF2BP0C7M4 288 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 SLC2A3P11169 496 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 COILP38432 576 aaPredicted RBP13.94□□□□□ -0.18
VMP1-217ENST00000593168 NUBP1P53384 320 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 DHX34Q14147 1143 aaKnown RBP13.94□□□□□ -0.18
VMP1-217ENST00000593168 ANKRD20A8PQ5CZ79 823 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 DRICH1Q6PGQ1 229 aaPredicted RBP13.94□□□□□ -0.18
VMP1-217ENST00000593168 KLHDC10Q6PID8 442 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 RFX6Q8HWS3 928 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 RUBCNQ92622 972 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 SLC39A13Q96H72 371 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 HAPLN3Q96S86 360 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 KCTD15Q96SI1 283 aaPredicted RBP13.94□□□□□ -0.18
VMP1-217ENST00000593168 RHOXF2Q9BQY4 288 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 TKTL2Q9H0I9 626 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 OSBPL2Q9H1P3 480 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 POMKQ9H5K3 350 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 TRPM5Q9NZQ8 1165 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 FEZ2Q9UHY8 353 aaPredicted RBP13.94□□□□□ -0.18
VMP1-217ENST00000593168 SORCS3Q9UPU3 1222 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 TLR6Q9Y2C9 796 aa13.94□□□□□ -0.18
VMP1-217ENST00000593168 PRR23AA6NEV1 266 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 FAM187AA6NFU0 413 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 H3BRJ5 948 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 I6L893 689 aaPredicted RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 APOC4-APOC2K7ER74 178 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 RAD51CO43502 376 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 TLR5O60602 858 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 APOC2P02655 101 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 LRG1P02750 347 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 C8AP07357 584 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 SPATA31D3P0C874 917 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 ZFXP17010 805 aaPredicted RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 HOXB8P17481 243 aaPredicted RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 ARL4AP40617 200 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 HCAR3P49019 387 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 TUBP50607 506 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 KPNA1P52294 538 aaPredicted RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 EFEMP1Q12805 493 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 SEMA3BQ13214 749 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 TRIP4Q15650 581 aaPredicted RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 PPP6R3Q5H9R7 873 aaPredicted RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 HECTD3Q5T447 861 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 SLC9A4Q6AI14 798 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 CCDC137Q6PK04 289 aaKnown RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 SPATA31D4Q6ZUB0 917 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 UBALD2Q8IYN6 164 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 ATL2Q8NHH9 583 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms