RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 TRIM72Q6ZMU5 477 aa17.02■□□□□ 0.32
CIRBP-233ENST00000591622 LUZP1Q86V48 1076 aa17.02■□□□□ 0.32
CIRBP-233ENST00000591622 HJURPQ8NCD3 748 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-233ENST00000591622 MDGA1Q8NFP4 955 aa17.02■□□□□ 0.32
CIRBP-233ENST00000591622 BTN2A3PQ96KV6 586 aa17.02■□□□□ 0.32
CIRBP-233ENST00000591622 NAP1L5Q96NT1 182 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-233ENST00000591622 HINFPQ9BQA5 517 aa17.02■□□□□ 0.32
CIRBP-233ENST00000591622 RRN3Q9NYV6 651 aa17.02■□□□□ 0.32
CIRBP-233ENST00000591622 XPO7Q9UIA9 1087 aaKnown RBP17.02■□□□□ 0.32
CIRBP-233ENST00000591622 WDR87Q6ZQQ6 2873 aa17.02■□□□□ 0.31
CIRBP-233ENST00000591622 MYOFQ9NZM1 2061 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 SYNJ2BP-COX16A0A087WUM0 186 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 A0A1B0GTH6 734 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 A0A1W2PQC6 194 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 KCNU1A8MYU2 1149 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 TIMM44O43615 452 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 TBL1XO60907 577 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 HOXB2P14652 356 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 MMP8P22894 467 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 HLA-FP30511 346 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 CCR1P32246 355 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 RNASE9P60153 205 aaKnown RBP17.01■□□□□ 0.31
CIRBP-233ENST00000591622 TPM4P67936 248 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 EIF4HQ15056 248 aaKnown RBP17.01■□□□□ 0.31
CIRBP-233ENST00000591622 MS4A13Q5J8X5 152 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 FAM102AQ5T9C2 384 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-233ENST00000591622 DCLK2Q8N568 766 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 ATP6V0D2Q8N8Y2 350 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 UCMAQ8WVF2 138 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 RNF34Q969K3 372 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 PRICKLE1Q96MT3 831 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-233ENST00000591622 NPY6RQ99463 290 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 GABRG3Q99928 467 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 TPSD1Q9BZJ3 242 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 NUCKS1Q9H1E3 243 aaKnown RBP17.01■□□□□ 0.31
CIRBP-233ENST00000591622 ELOVL2Q9NXB9 296 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.01■□□□□ 0.31
CIRBP-233ENST00000591622 COX16Q9P0S2 106 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 SLC12A6Q9UHW9 1150 aa17.01■□□□□ 0.31
CIRBP-233ENST00000591622 A0A1W2PQF6 199 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 TCRBV21S2A2A0A5A6 115 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 TYW5A2RUC4 315 aaKnown RBP17■□□□□ 0.31
CIRBP-233ENST00000591622 M0QYT0 321 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 NPC1O15118 1278 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 SERPINC1P01008 464 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 ABCB4P21439 1286 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 RPS24P62847 133 aaKnown RBP17■□□□□ 0.31
CIRBP-233ENST00000591622 NME3Q13232 169 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 E2F5Q15329 346 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 USP39Q53GS9 565 aaKnown RBP17■□□□□ 0.31
CIRBP-233ENST00000591622 RAP1GAP2Q684P5 730 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 TMEM215Q68D42 235 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 MMS22LQ6ZRQ5 1243 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 KIAA0907Q7Z7F0 614 aaPredicted RBP17■□□□□ 0.31
CIRBP-233ENST00000591622 FAM160A2Q8N612 972 aaPredicted RBP17■□□□□ 0.31
CIRBP-233ENST00000591622 DDX51Q8N8A6 666 aaKnown RBP eCLIP17■□□□□ 0.31
CIRBP-233ENST00000591622 ZNF557Q8N988 423 aaPredicted RBP17■□□□□ 0.31
CIRBP-233ENST00000591622 NT5C3BQ969T7 300 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 MYEOVQ96EZ4 313 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 PCDHB18PQ96TA0 734 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 CIPCQ9C0C6 399 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 ABCB8Q9NUT2 735 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 CACNA2D2Q9NY47 1150 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 STIM2Q9P246 746 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 THAP10Q9P2Z0 257 aaPredicted RBP17■□□□□ 0.31
CIRBP-233ENST00000591622 GMEB2Q9UKD1 530 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 STAP1Q9ULZ2 295 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 MYO6Q9UM54 1294 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 STON1Q9Y6Q2 735 aa17■□□□□ 0.31
CIRBP-233ENST00000591622 WASH3PC4AMC7 463 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 GOLGA8SH3BPF8 625 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 RETP07949 1114 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 CCDC172P0C7W6 258 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 UNGP13051 313 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-233ENST00000591622 FERP16591 822 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 TACR2P21452 398 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 MTA1Q13330 715 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 ENPP2Q13822 863 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 NR1I3Q14994 352 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 OTUD1Q5VV17 481 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-233ENST00000591622 ARCQ7LC44 396 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-233ENST00000591622 KBTBD6Q86V97 674 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 CHSY1Q86X52 802 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 MFN1Q8IWA4 741 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 LGI2Q8N0V4 545 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 CFAP52Q8N1V2 620 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 SLC30A5Q8TAD4 765 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 OLIG1Q8TAK6 271 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 FIBINQ8TAL6 211 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 WFDC5Q8TCV5 224 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 WFIKKN2Q8TEU8 576 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 HMGB4Q8WW32 186 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 BAP1Q92560 729 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 ZC3H10Q96K80 434 aaKnown RBP16.99■□□□□ 0.31
CIRBP-233ENST00000591622 PRMT1Q99873 361 aaKnown RBP16.99■□□□□ 0.31
CIRBP-233ENST00000591622 AGPAT1Q99943 283 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 ADAM33Q9BZ11 813 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 CD248Q9HCU0 757 aa16.99■□□□□ 0.31
CIRBP-233ENST00000591622 CALCOCO1Q9P1Z2 691 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms