RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ALCAMQ13740 583 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 OXA1LQ15070 435 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 FIP1L1Q6UN15 594 aaKnown RBP12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 FRA10AC1Q70Z53 315 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 CAND1Q86VP6 1230 aaKnown RBP12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 RBM15BQ8NDT2 890 aaKnown RBP12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 TSPAN14Q8NG11 270 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 ADAMTS16Q8TE57 1224 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 HERVK_113Q902F9 699 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 CD101Q93033 1021 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 RBM15Q96T37 977 aaKnown RBP eCLIP12.58□□□□□ -0.392e-6■■■■□ 21.5
SMARCA4-217ENST00000591595 MXRA8Q9BRK3 442 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 ANKMY1Q9P2S6 941 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 AP4B1Q9Y6B7 739 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 XPO1O14980 1071 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 ALAS1P13196 640 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 RFC1P35251 1148 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 NR4A2P43354 598 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 QARSP47897 775 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 ATP6V0D1P61421 351 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 PLEKHA7Q6IQ23 1121 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 GLRX5Q86SX6 157 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 GPR180Q86V85 440 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 DCP2Q8IU60 420 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 GSTCDQ8NEC7 633 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 FBXL13Q8NEE6 735 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 RFWD2Q8NHY2 731 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 POMGNT1Q8WZA1 660 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 SHC3Q92529 594 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 SCPEP1Q9HB40 452 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 ANKFY1Q9P2R3 1169 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 VANGL2Q9ULK5 521 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 INPP5FQ9Y2H2 1132 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 AHDC1Q5TGY3 1603 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 H3BNX3 289 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 MYCLP12524 364 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 ITGB5P18084 799 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 YWHABP31946 246 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 SSTR3P32745 418 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 BMPR1AP36894 532 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 HADHAP40939 763 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 ALDH3B2P48448 385 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 SIX1Q15475 284 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 LSM12Q3MHD2 195 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 STRIP1Q5VSL9 837 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 FBXO27Q8NI29 283 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 C7orf43Q8WVR3 580 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 C12orf43Q96C57 262 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 ISOC1Q96CN7 298 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 PRMT6Q96LA8 375 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 C1orf74Q96LT6 269 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 RIT2Q99578 217 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 ADAM33Q9BZ11 813 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 AAASQ9NRG9 546 aa12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 APOBEC2Q9Y235 224 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-217ENST00000591595 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 POC1B-GALNT4F8VUJ3 575 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 CRTAMO95727 393 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 RRM1P23921 792 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 NSFP46459 744 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 MLLT6P55198 1093 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 MOGQ16653 247 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 C1orf220Q5T0J3 134 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 PLA2G4FQ68DD2 849 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 ACAD10Q6JQN1 1059 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 CCDC28AQ8IWP9 274 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 DCUN1D1Q96GG9 259 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 MTMR12Q9C0I1 747 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 DNAI2Q9GZS0 605 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 HOXD1Q9GZZ0 328 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 RAB20Q9NX57 234 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 BCAP29Q9UHQ4 241 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 RAB26Q9ULW5 256 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 B3GNT3Q9Y2A9 372 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 CORINQ9Y5Q5 1042 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 ACTL7BQ9Y614 415 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 SRCAPQ6ZRS2 3230 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 TMX2-CTNND1H3BSU7 103 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 ZC3H11AO75152 810 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 CDH16O75309 829 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 RALAP11233 206 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 KRT15P19012 456 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 MAN1A1P33908 653 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 POLD2P49005 469 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 MCCD1P59942 119 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 PPP6R3Q5H9R7 873 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 AGAP7PQ5VUJ5 663 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 USP37Q86T82 979 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 PRUNE1Q86TP1 453 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 ANKRD13AQ8IZ07 590 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 ZNF641Q96N77 438 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 ARHGEF4Q9NR80 690 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 CDH7Q9ULB5 785 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 MAFFQ9ULX9 164 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 NAALADL1Q9UQQ1 740 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 COMMD10Q9Y6G5 202 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 PCM1Q15154 2024 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 C10orf71Q711Q0 1435 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 ATAD5Q96QE3 1844 aa12.57□□□□□ -0.4
SMARCA4-217ENST00000591595 A0A1B0GTW7 788 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms