RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 OTUD1Q5VV17 481 aaPredicted RBP13.43□□□□□ -0.26
PTBP1-216ENST00000590887 PLPP4Q5VZY2 271 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 RFX8Q6ZV50 586 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 HDXQ7Z353 690 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 ALLCQ8N6M5 410 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 PCDH19Q8TAB3 1148 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 SLC35B2Q8TB61 432 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 AUTS2Q8WXX7 1259 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 SEC14L1Q92503 715 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 MRPS31Q92665 395 aaKnown RBP13.43□□□□□ -0.26
PTBP1-216ENST00000590887 AZIN2Q96A70 460 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 PLD4Q96BZ4 506 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 TBC1D31Q96DN5 1066 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 SNF8Q96H20 258 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 FOXP3Q9BZS1 431 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 EPC1Q9H2F5 836 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 ALG13Q9NP73 1137 aaKnown RBP13.43□□□□□ -0.26
PTBP1-216ENST00000590887 WHRNQ9P202 907 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 DNPEPQ9ULA0 475 aa13.43□□□□□ -0.26
PTBP1-216ENST00000590887 COL4A4P53420 1690 aaPredicted RBP13.43□□□□□ -0.26
PTBP1-216ENST00000590887 ZNF840PA6NDX5 716 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 KCNU1A8MYU2 1149 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 H3BNC9 293 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 MTSS1O43312 755 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 XYLBO75191 536 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 C8AP07357 584 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 HNRNPA1P09651 372 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTBP1-216ENST00000590887 GOT1P17174 413 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 DDX6P26196 483 aaKnown RBP eCLIP13.42□□□□□ -0.265e-6■■■□□ 15
PTBP1-216ENST00000590887 HOXA9P31269 272 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 KCNJ1P48048 391 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 SLC11A2P49281 568 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 CLCN6P51797 869 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 PITX1P78337 314 aaPredicted RBP13.42□□□□□ -0.26
PTBP1-216ENST00000590887 MMRN1Q13201 1228 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 GPM6BQ13491 265 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 MTMR3Q13615 1198 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 PAFAH1B3Q15102 231 aaKnown RBP13.42□□□□□ -0.26
PTBP1-216ENST00000590887 SHHQ15465 462 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 CA9Q16790 459 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 RAB6CQ53S08 254 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 DUPD1Q68J44 220 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 TTC27Q6P3X3 843 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 LILRA6Q6PI73 481 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 FBXO38Q6PIJ6 1188 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 C1orf228Q6PIY5 440 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 LRRC49Q8IUZ0 686 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 ZDHHC14Q8IZN3 488 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 SLC39A13Q96H72 371 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 GDF15Q99988 308 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 RAB6CQ9H0N0 254 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 PCDH9Q9HC56 1237 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 MTMR10Q9NXD2 777 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 R3HDM2Q9Y2K5 976 aaKnown RBP13.42□□□□□ -0.26
PTBP1-216ENST00000590887 HEY1Q9Y5J3 304 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 MTCL1Q9Y4B5 1905 aaKnown RBP13.42□□□□□ -0.26
PTBP1-216ENST00000590887 PLXNA4Q9HCM2 1894 aa13.42□□□□□ -0.26
PTBP1-216ENST00000590887 BCLAF3A2AJT9 711 aaKnown RBP13.41□□□□□ -0.26
PTBP1-216ENST00000590887 LCHNA4D1U4 455 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 HMGA1P17096 107 aaKnown RBP13.41□□□□□ -0.26
PTBP1-216ENST00000590887 AMPD1P23109 780 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 EPHB2P29323 1055 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 MLLT6P55198 1093 aaPredicted RBP13.41□□□□□ -0.26
PTBP1-216ENST00000590887 ERVFC1P60507 584 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 ZNF33AQ06730 810 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 OASLQ15646 514 aaKnown RBP13.41□□□□□ -0.26
PTBP1-216ENST00000590887 HEATR6Q6AI08 1181 aaKnown RBP13.41□□□□□ -0.26
PTBP1-216ENST00000590887 RWDD4Q6NW29 188 aaKnown RBP13.41□□□□□ -0.26
PTBP1-216ENST00000590887 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 MIB1Q86YT6 1006 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 PQLC3Q8N755 202 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 TFB1MQ8WVM0 346 aaKnown RBP13.41□□□□□ -0.26
PTBP1-216ENST00000590887 CASKIN2Q8WXE0 1202 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 ATG4AQ8WYN0 398 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 CAVIN3Q969G5 261 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 FCRL2Q96LA5 508 aaPredicted RBP13.41□□□□□ -0.26
PTBP1-216ENST00000590887 C17orf80Q9BSJ5 609 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 ADAM33Q9BZ11 813 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 SIK2Q9H0K1 926 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 ASAH2Q9NR71 780 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 ARHGEF4Q9NR80 690 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 OSER1Q9NX31 292 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 CALCOCO1Q9P1Z2 691 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 PAK5Q9P286 719 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 PPARGC1AQ9UBK2 798 aaKnown RBP13.41□□□□□ -0.26
PTBP1-216ENST00000590887 ZNF510Q9Y2H8 683 aa13.41□□□□□ -0.26
PTBP1-216ENST00000590887 PAGE1O75459 146 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 ZMYND10O75800 440 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 LATS1O95835 1130 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 CA3P07451 260 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 PTPN2P17706 415 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 ERCC2P18074 760 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 TNNT3P45378 269 aaPredicted RBP13.4□□□□□ -0.26
PTBP1-216ENST00000590887 ADCY2Q08462 1091 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 SEMA3BQ13214 749 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 DPYSQ14117 519 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 SLMAPQ14BN4 828 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 P3H1Q32P28 736 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 ARHGAP15Q53QZ3 475 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms