RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 GALNT13Q8IUC8 556 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 STMN2Q93045 179 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 FAM122AQ96E09 287 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 TXNRD2Q9NNW7 524 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 GJB4Q9NTQ9 266 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 CPQQ9Y646 472 aa11.73□□□□□ -0.53
SEH1L-208ENST00000590843 TARSL2A2RTX5 802 aaKnown RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 SLC38A8A6NNN8 435 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 BUB1BO60566 1050 aaPredicted RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 TSPAN1O60635 241 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 POLBP06746 335 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 COX7A2P14406 83 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 NUDT1P36639 197 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 GCNT1Q02742 428 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 BTN2A3PQ96KV6 586 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 ASPSCR1Q9BZE9 553 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 CNOT10Q9H9A5 744 aaKnown RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 SYTL2Q9HCH5 934 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 XAB2Q9HCS7 855 aaKnown RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 A0A1W2PPC1 479 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 LRRC53A6NM62 1247 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 SLC6A3Q01959 620 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 ADSSL1Q8N142 457 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 ARMC5Q96C12 935 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 PRKD2Q9BZL6 878 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 TDP1Q9NUW8 608 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 C4BP0C0L5 1744 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 VSTM5A8MXK1 200 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 SNHG28P0DPA3 235 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 ITGB5P18084 799 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 VARSP26640 1264 aaKnown RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 STIP1P31948 543 aaKnown RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 PTPN9P43378 593 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 RAP1GAPP47736 663 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 GRASPQ7Z6J2 395 aaPredicted RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 SH3RF2Q8TEC5 729 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 CASKIN2Q8WXE0 1202 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 SMARCD2Q92925 531 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 HEMGNQ9BXL5 484 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 CYLDQ9NQC7 956 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.72□□□□□ -0.533e-6■■■■□ 20.1
SEH1L-208ENST00000590843 HEBP2Q9Y5Z4 205 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 SIGLEC1Q9BZZ2 1709 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 TRUB2O95900 331 aaKnown RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 UQCRBP14927 111 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 PSMC3P17980 439 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 MAPK1P28482 360 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 CTNNA1P35221 906 aaKnown RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 WASP42768 502 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 DR1Q01658 176 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 DBN1Q16643 649 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 C2orf27AQ580R0 203 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 DLK2Q6UY11 383 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 GJD3Q8N144 294 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 CYP2W1Q8TAV3 490 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 REXO5Q96IC2 774 aaKnown RBP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 NEUROG2Q9H2A3 272 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 MRGBPQ9NV56 204 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 RBM22Q9NW64 420 aaKnown RBP eCLIP11.72□□□□□ -0.53
SEH1L-208ENST00000590843 USH1CQ9Y6N9 552 aa11.72□□□□□ -0.53
SEH1L-208ENST00000590843 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 TRIM49BA6NDI0 452 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 SPAG6O75602 509 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 CFHP08603 1231 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 ZNF200P98182 395 aaPredicted RBP11.71□□□□□ -0.53
SEH1L-208ENST00000590843 CREB5Q02930 508 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 CSTF1Q05048 431 aaKnown RBP11.71□□□□□ -0.53
SEH1L-208ENST00000590843 SV2AQ7L0J3 742 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 HDXQ7Z353 690 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 DNAJB7Q7Z6W7 309 aaPredicted RBP11.71□□□□□ -0.53
SEH1L-208ENST00000590843 MYCBPAPQ8TBZ2 947 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 PPP1R13LQ8WUF5 828 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 BCAS3Q9H6U6 928 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 SPASTQ9UBP0 616 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 KLK3P07288 261 aaPredicted RBP11.71□□□□□ -0.53
SEH1L-208ENST00000590843 ALPIP09923 528 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 UCHL3P15374 230 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 RASSF2P50749 326 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 CNTN1Q12860 1018 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 RAP1GAP2Q684P5 730 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 ACAD10Q6JQN1 1059 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 FAM98AQ8NCA5 519 aaKnown RBP11.71□□□□□ -0.53
SEH1L-208ENST00000590843 IL31RAQ8NI17 732 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 LRRC8CQ8TDW0 803 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 ATL1Q8WXF7 558 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 NAT9Q9BTE0 207 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 GOLPH3Q9H4A6 298 aa11.71□□□□□ -0.53
SEH1L-208ENST00000590843 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.71□□□□□ -0.53
SEH1L-208ENST00000590843 RUVBL2Q9Y230 463 aaKnown RBP11.71□□□□□ -0.53
SEH1L-208ENST00000590843 EXOC1LA0A1B0GW35 172 aa11.71□□□□□ -0.54
SEH1L-208ENST00000590843 HSPA4LO95757 839 aa11.71□□□□□ -0.54
SEH1L-208ENST00000590843 ADH1BP00325 375 aa11.71□□□□□ -0.54
SEH1L-208ENST00000590843 DRD1P21728 446 aa11.71□□□□□ -0.54
SEH1L-208ENST00000590843 MMP13P45452 471 aa11.71□□□□□ -0.54
SEH1L-208ENST00000590843 RBL2Q08999 1139 aa11.71□□□□□ -0.54
SEH1L-208ENST00000590843 GDPD5Q8WTR4 605 aa11.71□□□□□ -0.54
SEH1L-208ENST00000590843 FAM3CQ92520 227 aa11.71□□□□□ -0.54
SEH1L-208ENST00000590843 ADAMTS10Q9H324 1103 aa11.71□□□□□ -0.54
SEH1L-208ENST00000590843 KCNMB3Q9NPA1 279 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms