RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 TBL1XO60907 577 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 RPP40O75818 363 aaKnown RBP23.19■■□□□ 1.3
MBD3-208ENST00000590830 TFE3P19532 575 aaPredicted RBP23.19■■□□□ 1.3
MBD3-208ENST00000590830 HLA-FP30511 346 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 NOS2P35228 1153 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 RNASE9P60153 205 aaKnown RBP23.19■■□□□ 1.3
MBD3-208ENST00000590830 ARID5AQ03989 594 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 ZSCAN23Q3MJ62 389 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 MS4A13Q5J8X5 152 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 TRMT11Q7Z4G4 463 aaKnown RBP23.19■■□□□ 1.3
MBD3-208ENST00000590830 KIAA0907Q7Z7F0 614 aaPredicted RBP23.19■■□□□ 1.3
MBD3-208ENST00000590830 LMLNQ96KR4 655 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 IRX2Q9BZI1 471 aaPredicted RBP23.19■■□□□ 1.3
MBD3-208ENST00000590830 TPSD1Q9BZJ3 242 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 FAM204AQ9H8W3 233 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.19■■□□□ 1.3
MBD3-208ENST00000590830 ELOVL2Q9NXB9 296 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 CACNA2D2Q9NY47 1150 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 INVSQ9Y283 1065 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 MYO18AQ92614 2054 aaKnown RBP23.19■■□□□ 1.3
MBD3-208ENST00000590830 CFAP54Q96N23 3096 aa23.19■■□□□ 1.3
MBD3-208ENST00000590830 ZNF292O60281 2723 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 SYNJ2BP-COX16A0A087WUM0 186 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 A0A1B0GTH6 734 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 MATKP42679 507 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 RPS24P62847 133 aaKnown RBP23.18■■□□□ 1.3
MBD3-208ENST00000590830 NR1I3Q14994 352 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 MPP7Q5T2T1 576 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 TRNP1Q6NT89 227 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 KIAA1211LQ6NV74 962 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 CEP68Q76N32 757 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 ANKS1BQ7Z6G8 1248 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 KBTBD6Q86V97 674 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 CHPFQ8IZ52 775 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 CFAP52Q8N1V2 620 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 SLC30A5Q8TAD4 765 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 SORCS1Q8WY21 1168 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 BAP1Q92560 729 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 NT5C3BQ969T7 300 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 ERLEC1Q96DZ1 483 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 NPY6RQ99463 290 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 GABRG3Q99928 467 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 COX16Q9P0S2 106 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 STIM2Q9P246 746 aa23.18■■□□□ 1.3
MBD3-208ENST00000590830 APOEP02649 317 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 TGM1P22735 817 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 MMP8P22894 467 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 SCNN1AP37088 669 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 RAP1GAP2Q684P5 730 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 IRF2BP2Q7Z5L9 587 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 PHLDB2Q86SQ0 1253 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 FAM160A2Q8N612 972 aaPredicted RBP23.17■■□□□ 1.3
MBD3-208ENST00000590830 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.17■■□□□ 1.3
MBD3-208ENST00000590830 OLIG1Q8TAK6 271 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 BTN2A3PQ96KV6 586 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 PRMT1Q99873 361 aaKnown RBP23.17■■□□□ 1.3
MBD3-208ENST00000590830 POLMQ9NP87 494 aaPredicted RBP23.17■■□□□ 1.3
MBD3-208ENST00000590830 ABCB8Q9NUT2 735 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.17■■□□□ 1.3
MBD3-208ENST00000590830 THAP10Q9P2Z0 257 aaPredicted RBP23.17■■□□□ 1.3
MBD3-208ENST00000590830 TMEM59LQ9UK28 342 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 RAD54BQ9Y620 910 aa23.17■■□□□ 1.3
MBD3-208ENST00000590830 TCRBV21S2A2A0A5A6 115 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 GOLGA8SH3BPF8 625 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 M0QYT0 321 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 UNGP13051 313 aaPredicted RBP23.16■■□□□ 1.3
MBD3-208ENST00000590830 HOXB2P14652 356 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 TACR2P21452 398 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 GBP1P32455 592 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 CD70P32970 193 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 PTP4A2Q12974 167 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 NME3Q13232 169 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 ENPP2Q13822 863 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 FILIP1LQ4L180 1135 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 FAM102AQ5T9C2 384 aaPredicted RBP23.16■■□□□ 1.3
MBD3-208ENST00000590830 LAIR1Q6GTX8 287 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 MMS22LQ6ZRQ5 1243 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 CACNA2D4Q7Z3S7 1137 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 ADIPOR2Q86V24 386 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 DDX50Q9BQ39 737 aaKnown RBP23.16■■□□□ 1.3
MBD3-208ENST00000590830 ANLNQ9NQW6 1124 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 NCDNQ9UBB6 729 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 RAB23Q9ULC3 237 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 STON1Q9Y6Q2 735 aa23.16■■□□□ 1.3
MBD3-208ENST00000590830 ALDH1A2O94788 518 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 GABRG2P18507 467 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 CCR1P32246 355 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 FLT3P36888 993 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 IL12RB1P42701 662 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 SKOR2Q2VWA4 1001 aaPredicted RBP23.15■■□□□ 1.3
MBD3-208ENST00000590830 SDE2Q6IQ49 451 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 LGI2Q8N0V4 545 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 FRMD1Q8N878 549 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 ATP6V0D2Q8N8Y2 350 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 HJURPQ8NCD3 748 aaPredicted RBP23.15■■□□□ 1.3
MBD3-208ENST00000590830 FIBINQ8TAL6 211 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 HMGB4Q8WW32 186 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 AGPAT1Q99943 283 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 HINFPQ9BQA5 517 aa23.15■■□□□ 1.3
MBD3-208ENST00000590830 PIGVQ9NUD9 493 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms