RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 MAPK15Q8TD08 544 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 NSUN6Q8TEA1 469 aaKnown RBP11.25□□□□□ -0.61
LINC01140-210ENST00000590653 CNKSR2Q8WXI2 1034 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 PICK1Q9NRD5 415 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 ZDHHC7Q9NXF8 308 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 TMCO1Q9UM00 188 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 FIS1Q9Y3D6 152 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 STYXL1Q9Y6J8 313 aa11.25□□□□□ -0.61
LINC01140-210ENST00000590653 SF3B1O75533 1304 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC01140-210ENST00000590653 B4GALT5O43286 388 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 USP12O75317 370 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 CSPG5O95196 566 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 GSRP00390 522 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 SUPT20HL2P0C7V6 817 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 EPHA3P29320 983 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 PTPN11Q06124 597 aaPredicted RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 DLG2Q15700 870 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 PGM2L1Q6PCE3 622 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ARCQ7LC44 396 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 NLGN1Q8N2Q7 840 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 UBR7Q8N806 425 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 JADE3Q92613 823 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 TMA16Q96EY4 203 aaKnown RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 PRICKLE1Q96MT3 831 aaPredicted RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 AGAP3Q96P47 875 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 SORT1Q99523 831 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ELOVL4Q9GZR5 314 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 CAB39LQ9H9S4 337 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ANLNQ9NQW6 1124 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ITGA11Q9UKX5 1188 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 PCDHGC3Q9UN70 934 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 GNEQ9Y223 722 aaKnown RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 TDRKHQ9Y2W6 561 aaKnown RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 WDR46O15213 610 aaKnown RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ATG7O95352 703 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ITGB3P05106 788 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 CPA3P15088 417 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 TFE3P19532 575 aaPredicted RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 THOP1P52888 689 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 MCCD1P59942 119 aaPredicted RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ABCE1P61221 599 aaKnown RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 FAM47CQ5HY64 1035 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 TMEM198Q66K66 360 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 KCNT2Q6UVM3 1135 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 FAM183BPQ6ZVS7 135 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ADGRG6Q86SQ4 1221 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ANKRD36BP1Q96IX9 119 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 KCNK16Q96T55 309 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 CNPY3Q9BT09 278 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 B3GNT5Q9BYG0 378 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 Q9H521 79 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 PNPLA8Q9NP80 782 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ZNF711Q9Y462 761 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 FAM159BA6NKW6 160 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 GOLGA8TH3BQL2 631 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 ADARP55265 1226 aaKnown RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 RARS2Q5T160 578 aaKnown RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 PACS1Q6VY07 963 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 KBTBD6Q86V97 674 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 TRIM50Q86XT4 487 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 PLD6Q8N2A8 252 aaKnown RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 TRIML2Q8N7C3 387 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 BHLHE22Q8NFJ8 381 aaPredicted RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 GPRASP2Q96D09 838 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 CCDC28BQ9BUN5 200 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 SNRNP25Q9BV90 132 aaKnown RBP11.24□□□□□ -0.61
LINC01140-210ENST00000590653 XYLT2Q9H1B5 865 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 SYNPO2Q9UMS6 1093 aa11.24□□□□□ -0.61
LINC01140-210ENST00000590653 CNTNAP1P78357 1384 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 PLA2G6O60733 806 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 GLRA3O75311 464 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 IL4RP24394 825 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 SERPINB9P50453 376 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 ZNF143P52747 638 aaPredicted RBP11.23□□□□□ -0.61
LINC01140-210ENST00000590653 SNAPC2Q13487 334 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 GRM2Q14416 872 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 TAZQ16635 292 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 Q3C1V9 767 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 EEF1DP3Q658K8 133 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 SLC4A11Q8NBS3 891 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 CCNYQ8ND76 341 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 GRIN3AQ8TCU5 1115 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 CDKL2Q92772 493 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 LGMNQ99538 433 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 MRPL4Q9BYD3 311 aaKnown RBP11.23□□□□□ -0.61
LINC01140-210ENST00000590653 PCDH18Q9HCL0 1135 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 SLX4Q8IY92 1834 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 ADGRA2Q96PE1 1338 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 VWA5AO00534 786 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 OGTO15294 1046 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 PRKCBP05771 671 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 CHRNGP07510 517 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 HPCAP84074 193 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 CDKL1Q00532 357 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 MYBPC1Q00872 1141 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 SLC10A2Q12908 348 aaPredicted RBP11.23□□□□□ -0.61
LINC01140-210ENST00000590653 SH2D4BQ5SQS7 431 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 TSHZ1Q6ZSZ6 1077 aa11.23□□□□□ -0.61
LINC01140-210ENST00000590653 ZNF534Q76KX8 674 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms