RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 MS4A13Q5J8X5 152 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 TJAP1Q5JTD0 557 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 ERMARDQ5T6L9 678 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 PIK3R6Q5UE93 754 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 LRRC38Q5VT99 294 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 SCYL2Q6P3W7 929 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 POLNQ7Z5Q5 900 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 DAAM2Q86T65 1068 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 CPNE8Q86YQ8 564 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 YAF2Q8IY57 180 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 ZNF683Q8IZ20 524 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 CCAR2Q8N163 923 aaKnown RBP12.49□□□□□ -0.41
APOC1-206ENST00000590334 KIAA1524Q8TCG1 905 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 UBE2Q2Q8WVN8 375 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 TEKT4Q8WW24 435 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 ATP2A3Q93084 1043 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 DDX50Q9BQ39 737 aaKnown RBP12.49□□□□□ -0.41
APOC1-206ENST00000590334 LINC00597Q9H2U6 94 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 TMPRSS4Q9NRS4 437 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 XPO7Q9UIA9 1087 aaKnown RBP12.49□□□□□ -0.41
APOC1-206ENST00000590334 GUCA1BQ9UMX6 200 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 HS3ST4Q9Y661 456 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 WNT6Q9Y6F9 365 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 CHD5Q8TDI0 1954 aa12.49□□□□□ -0.41
APOC1-206ENST00000590334 GOLGA6L9A6NEM1 432 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 TMEM110-MUSTN1A8MSY1 372 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 NFATC1O95644 943 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 MOCS2O96007 188 aaPredicted RBP12.48□□□□□ -0.41
APOC1-206ENST00000590334 ASGR2P07307 311 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 GDI1P31150 447 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 SLC6A4P31645 630 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 IFNAR2P48551 515 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 NAP1L1P55209 391 aaKnown RBP12.48□□□□□ -0.41
APOC1-206ENST00000590334 TAS2R40P59535 323 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 SEMA3BQ13214 749 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 HADHQ16836 314 aaKnown RBP12.48□□□□□ -0.41
APOC1-206ENST00000590334 RNF43Q68DV7 783 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 SYCE1Q8N0S2 351 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 TTC16Q8NEE8 873 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 FAM71BQ8TC56 605 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 IRF7Q92985 503 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 CD101Q93033 1021 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 ZFYVE19Q96K21 471 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 SNRNP25Q9BV90 132 aaKnown RBP12.48□□□□□ -0.41
APOC1-206ENST00000590334 HPS4Q9NQG7 708 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 SLC2A4RGQ9NR83 387 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 SPHK2Q9NRA0 654 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 MARK1Q9P0L2 795 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 PCSK1NQ9UHG2 260 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 AP4E1Q9UPM8 1137 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 CAPN6Q9Y6Q1 641 aa12.48□□□□□ -0.41
APOC1-206ENST00000590334 IGLV3-10A0A075B6K4 115 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 GOLGA6L7A0A1B0GV03 622 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 SCAMP3O14828 347 aaKnown RBP12.47□□□□□ -0.41
APOC1-206ENST00000590334 PALMO75781 387 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 KRT7P08729 469 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 RARAP10276 462 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 SRFP11831 508 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 TACR2P21452 398 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 L1CAMP32004 1257 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 HTR7P34969 479 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 RUNX3Q13761 415 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 AUHQ13825 339 aaKnown RBP12.47□□□□□ -0.41
APOC1-206ENST00000590334 DPYSL2Q16555 572 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 EFHC2Q5JST6 749 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 MPP7Q5T2T1 576 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 MANEALQ5VSG8 457 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 RAP1GAP2Q684P5 730 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 TRIM68Q6AZZ1 485 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 TXNRD3NBQ6F5E7 133 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 RHBDF2Q6PJF5 856 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 NT5DC3Q86UY8 548 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 TMEM25Q86YD3 366 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 RNF135Q8IUD6 432 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 RHOT1Q8IXI2 618 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 DNASE1L2Q92874 299 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 PRICKLE1Q96MT3 831 aaPredicted RBP12.47□□□□□ -0.41
APOC1-206ENST00000590334 GOLPH3Q9H4A6 298 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 EBF3Q9H4W6 596 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 BRD9Q9H8M2 597 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 PPARGC1AQ9UBK2 798 aaKnown RBP12.47□□□□□ -0.41
APOC1-206ENST00000590334 OR12D3Q9UGF7 316 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 DUSP12Q9UNI6 340 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 SORCS3Q9UPU3 1222 aa12.47□□□□□ -0.41
APOC1-206ENST00000590334 OTOL1A6NHN0 477 aaPredicted RBP12.46□□□□□ -0.41
APOC1-206ENST00000590334 DRGXA6NNA5 263 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 USP27XA6NNY8 438 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 E9PAM4 449 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 F5H5T6 163 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 HOXC11O43248 304 aaPredicted RBP12.46□□□□□ -0.41
APOC1-206ENST00000590334 PSTPIP1O43586 416 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 SPOPO43791 374 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 PENKP01210 267 aaPredicted RBP12.46□□□□□ -0.41
APOC1-206ENST00000590334 CYP17A1P05093 508 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 ARSAP15289 507 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 HOXC13P31276 330 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 ARSEP51690 589 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 ZNF135P52742 658 aaPredicted RBP12.46□□□□□ -0.41
APOC1-206ENST00000590334 TNK2Q07912 1038 aa12.46□□□□□ -0.41
APOC1-206ENST00000590334 DHCR24Q15392 516 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms