RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 UTP6Q9NYH9 597 aaKnown RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 RUVBL2Q9Y230 463 aaKnown RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 TIAM2Q8IVF5 1701 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 NCF1BA6NI72 391 aaPredicted RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 NCF1CA8MVU1 366 aaPredicted RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 NCF1P14598 390 aaPredicted RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 NME5P56597 212 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 PLIN5Q00G26 463 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 PIP4K2CQ8TBX8 421 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 SCG3Q8WXD2 468 aaKnown RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 PHF21BQ96EK2 531 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 P2RY11Q96G91 374 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 TMEM120AQ9BXJ8 343 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 LRRC40Q9H9A6 602 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 IL1RL2Q9HB29 575 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 TRMT13Q9NUP7 481 aaKnown RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 CBX4O00257 560 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 TAC1P20366 129 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 SP100P23497 879 aaPredicted RBP14.97□□□□□ -0.01
RETREG3-208ENST00000589797 WEE1P30291 646 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 VEPH1Q14D04 833 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 SLC1A5Q15758 541 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 ACAD11Q709F0 780 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 NT5DC4Q86YG4 428 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 PACSIN3Q9UKS6 424 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 MATKP42679 507 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 KCNJ2P63252 427 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 EXOC2Q96KP1 924 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 B3GALT6Q96L58 329 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 CSPG4P5Q96PW8 444 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 STRA6Q9BX79 667 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 DONSONQ9NYP3 566 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 SCN9AQ15858 1988 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 ALOX15BO15296 676 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 MRPS5P82675 430 aaKnown RBP14.97□□□□□ -0.01
RETREG3-208ENST00000589797 CSHL1Q14406 222 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 KCNA10Q16322 511 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 SYPL2Q5VXT5 272 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 CMC1Q7Z7K0 106 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 RNF148Q8N7C7 305 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 PCDH19Q8TAB3 1148 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 HSFY1Q96LI6 401 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.97□□□□□ -0.01
RETREG3-208ENST00000589797 PRKAG2Q9UGJ0 569 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 TRIM17Q9Y577 477 aa14.97□□□□□ -0.01
RETREG3-208ENST00000589797 FAM237BA0A1B0GVD1 139 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 CFAP73A6NFT4 308 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 ATG7O95352 703 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 TFE3P19532 575 aaPredicted RBP14.96□□□□□ -0.01
RETREG3-208ENST00000589797 MMP13P45452 471 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 MAPRE1Q15691 268 aaKnown RBP14.96□□□□□ -0.01
RETREG3-208ENST00000589797 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.96□□□□□ -0.01
RETREG3-208ENST00000589797 CKAP2Q8WWK9 683 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 SOCS4Q8WXH5 440 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 TMEM169Q96HH4 297 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 C2CD4BA6NLJ0 364 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 YJEFN3A6XGL0 299 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 MEIS3P2A8K0S8 358 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 E7ENQ6 273 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 SOAT2O75908 522 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 ATP5HO75947 161 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 TMEM63AO94886 807 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 NFKB1P19838 968 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 AXLP30530 894 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 SERPINB5P36952 375 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 IL1RL1Q01638 556 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 MAP3K10Q02779 954 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 ACAP1Q15027 740 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 RASIP1Q5U651 963 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 UNC5AQ6ZN44 842 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 FAM35AQ86V20 835 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.96□□□□□ -0.01
RETREG3-208ENST00000589797 SCAMP5Q8TAC9 235 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 MID2Q9UJV3 735 aa14.96□□□□□ -0.01
RETREG3-208ENST00000589797 DDX60Q8IY21 1712 aaKnown RBP14.96□□□□□ -0.01
RETREG3-208ENST00000589797 SMIM35A0A1B0GVV1 85 aa14.96□□□□□ -0.02
RETREG3-208ENST00000589797 CCDC22O60826 627 aa14.96□□□□□ -0.02
RETREG3-208ENST00000589797 HARS2P49590 506 aaKnown RBP14.96□□□□□ -0.02
RETREG3-208ENST00000589797 SPATA24Q86W54 205 aa14.96□□□□□ -0.02
RETREG3-208ENST00000589797 UNC5BQ8IZJ1 945 aa14.96□□□□□ -0.02
RETREG3-208ENST00000589797 LRRC52Q8N7C0 313 aa14.96□□□□□ -0.02
RETREG3-208ENST00000589797 EGFL8Q99944 293 aa14.96□□□□□ -0.02
RETREG3-208ENST00000589797 DUSP16Q9BY84 665 aa14.96□□□□□ -0.02
RETREG3-208ENST00000589797 SLC17A6Q9P2U8 582 aa14.96□□□□□ -0.02
RETREG3-208ENST00000589797 NQO1P15559 274 aaKnown RBP14.95□□□□□ -0.02
RETREG3-208ENST00000589797 OR1E1P30953 314 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 KPNA2P52292 529 aaKnown RBP14.95□□□□□ -0.02
RETREG3-208ENST00000589797 CRHR2Q13324 411 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 TRABD2AQ86V40 505 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 MSL3Q8N5Y2 521 aaKnown RBP14.95□□□□□ -0.02
RETREG3-208ENST00000589797 PCED1BQ96HM7 432 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 KLHL5Q96PQ7 755 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 TUBB6Q9BUF5 446 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 XYLT2Q9H1B5 865 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 MYLK2Q9H1R3 596 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 FBXO6Q9NRD1 293 aaPredicted RBP14.95□□□□□ -0.02
RETREG3-208ENST00000589797 ATP11BQ9Y2G3 1177 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 SMAPO00193 183 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 SUPT7LO94864 414 aa14.95□□□□□ -0.02
RETREG3-208ENST00000589797 CKMP06732 381 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms