RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 BBS2Q9BXC9 721 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 GANQ9H2C0 597 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 HSD3B7Q9H2F3 369 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 SYNCQ9H7C4 482 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 FBRSL1Q9HCM7 1045 aaKnown RBP10.82□□□□□ -0.68
SDF2-208ENST00000589788 NLRC4Q9NPP4 1024 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 PRMT8Q9NR22 394 aaPredicted RBP10.82□□□□□ -0.68
SDF2-208ENST00000589788 WDR35Q9P2L0 1181 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 SFMBT1Q9UHJ3 866 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 CYTH4Q9UIA0 394 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 SIK3Q9Y2K2 1263 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 HBS1LQ9Y450 684 aaKnown RBP10.82□□□□□ -0.68
SDF2-208ENST00000589788 ATG2BQ96BY7 2078 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 NEDD8-MDP1E9PL57 170 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 HOXC11O43248 304 aaPredicted RBP10.81□□□□□ -0.68
SDF2-208ENST00000589788 PAPSS1O43252 624 aaPredicted RBP10.81□□□□□ -0.68
SDF2-208ENST00000589788 MSI1O43347 362 aaKnown RBP10.81□□□□□ -0.68
SDF2-208ENST00000589788 GFPT2O94808 682 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 KLKB1P03952 638 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 APODP05090 189 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 SOX5P35711 763 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 CHKAP35790 457 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 EIF2DP41214 584 aaKnown RBP10.81□□□□□ -0.68
SDF2-208ENST00000589788 SLC6A11P48066 632 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 KDSRQ06136 332 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 GAS6Q14393 721 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 GAB4Q2WGN9 574 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 ZNF528Q3MIS6 628 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 TAF3Q5VWG9 929 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 MSANTD2Q6P1R3 559 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 Q6ZNB5 142 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 TMEM110Q86TL2 294 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 MAML2Q8IZL2 1156 aaPredicted RBP10.81□□□□□ -0.68
SDF2-208ENST00000589788 NAT16Q8N8M0 369 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 TMEM35BQ8NCS4 154 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 C1orf131Q8NDD1 294 aaKnown RBP10.81□□□□□ -0.68
SDF2-208ENST00000589788 XPO6Q96QU8 1125 aaKnown RBP10.81□□□□□ -0.68
SDF2-208ENST00000589788 ERGIC2Q96RQ1 377 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 GRPEL1Q9HAV7 217 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 ARHGEF4Q9NR80 690 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 DEC1Q9P2X7 70 aa10.81□□□□□ -0.68
SDF2-208ENST00000589788 EPHB6O15197 1021 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 ICMTO60725 284 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 TULP3O75386 442 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 KAT7O95251 611 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 SERPINC1P01008 464 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 CYBBP04839 570 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 TYRP14679 529 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 NBL1P41271 181 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 STAT1P42224 750 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 GRIA2P42262 883 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 MRE11P49959 708 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 NRLP54845 237 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 YWHAZP63104 245 aaKnown RBP10.8□□□□□ -0.68
SDF2-208ENST00000589788 RELBQ01201 579 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 SATB1Q01826 763 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 TRIP4Q15650 581 aaPredicted RBP10.8□□□□□ -0.68
SDF2-208ENST00000589788 EFHC1Q5JVL4 640 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 OR6B2Q6IFH4 312 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 TSSK4Q6SA08 328 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 TOGARAM2Q6ZUX3 1019 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 APTXQ7Z2E3 356 aaKnown RBP10.8□□□□□ -0.68
SDF2-208ENST00000589788 CACNA2D4Q7Z3S7 1137 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 NOP9Q86U38 636 aaKnown RBP10.8□□□□□ -0.68
SDF2-208ENST00000589788 C12orf40Q86WS4 652 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 WDTC1Q8N5D0 677 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 MSANTD4Q8NCY6 345 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 ATRIPQ8WXE1 791 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 BHMTQ93088 406 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 ACDQ96AP0 544 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 CPXM1Q96SM3 734 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 C2orf49Q9BVC5 232 aaPredicted RBP10.8□□□□□ -0.68
SDF2-208ENST00000589788 FAM126AQ9BYI3 521 aaPredicted RBP10.8□□□□□ -0.68
SDF2-208ENST00000589788 POPDC2Q9HBU9 364 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 DNAJC17Q9NVM6 304 aaKnown RBP10.8□□□□□ -0.68
SDF2-208ENST00000589788 AGO1Q9UL18 857 aaKnown RBP10.8□□□□□ -0.68
SDF2-208ENST00000589788 SLC8A2Q9UPR5 921 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 NAALADL1Q9UQQ1 740 aa10.8□□□□□ -0.68
SDF2-208ENST00000589788 KIAA1549LQ6ZVL6 1849 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 TBC1D3BA6NDS4 549 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 CACNG3O60359 315 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 HSF2BPO75031 334 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 LSM8O95777 96 aaKnown RBP10.79□□□□□ -0.68
SDF2-208ENST00000589788 FYNP06241 537 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 GLI1P08151 1106 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 SLC11A2P49281 568 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 TBX4P57082 545 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 JAM2P57087 298 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 ARID5AQ03989 594 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 C2orf27AQ580R0 203 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 NUGGCQ68CJ6 796 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 GRAMD4Q6IC98 578 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 DNAJC14Q6Y2X3 702 aaPredicted RBP10.79□□□□□ -0.68
SDF2-208ENST00000589788 BEND5Q7L4P6 421 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 ERICH1Q86X53 443 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 ZNF677Q86XU0 584 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 UNC45BQ8IWX7 931 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 ETFBKMTQ8IXQ9 262 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 CPXM2Q8N436 756 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 RPLP0P6Q8NHW5 317 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms