RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 YAF2Q8IY57 180 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 DEPDC1BQ8WUY9 529 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 OSCP1Q8WVF1 389 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 UBE2Q2Q8WVN8 375 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 HSPH1Q92598 858 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 CD101Q93033 1021 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 NXPE3Q969Y0 559 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 OTUB2Q96DC9 234 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 C1orf74Q96LT6 269 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 DDX50Q9BQ39 737 aaKnown RBP15.72■□□□□ 0.11
ATG4D-211ENST00000589753 SIK2Q9H0K1 926 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 OSBPL2Q9H1P3 480 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 DHX35Q9H5Z1 703 aaKnown RBP15.72■□□□□ 0.11
ATG4D-211ENST00000589753 GPATCH2LQ9NWQ4 482 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 PRKAG3Q9UGI9 489 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 LIMD1Q9UGP4 676 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.72■□□□□ 0.11
ATG4D-211ENST00000589753 WNT6Q9Y6F9 365 aa15.72■□□□□ 0.11
ATG4D-211ENST00000589753 GOLGA6L7A0A1B0GV03 622 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 MIF4GDA9UHW6 222 aaKnown RBP15.71■□□□□ 0.11
ATG4D-211ENST00000589753 LOC730098B7Z3J9 87 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 TACR2P21452 398 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 CTNNA2P26232 953 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 CTNNA1P35221 906 aaKnown RBP15.71■□□□□ 0.11
ATG4D-211ENST00000589753 CHKAP35790 457 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 IFNAR2P48551 515 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 MLLT6P55198 1093 aaPredicted RBP15.71■□□□□ 0.11
ATG4D-211ENST00000589753 FCHO2Q0JRZ9 810 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 GRM2Q14416 872 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 CA9Q16790 459 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 ATP13A4Q4VNC1 1196 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 FAM133BQ5BKY9 247 aaKnown RBP15.71■□□□□ 0.11
ATG4D-211ENST00000589753 ZFYVE27Q5T4F4 411 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 RAP1GAP2Q684P5 730 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 ZSCAN30Q86W11 494 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 CHSY1Q86X52 802 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 ADHFE1Q8IWW8 467 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 FAM217AQ8IXS0 508 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 SLC35F6Q8N357 371 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 RSAD2Q8WXG1 361 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 PRMT1Q99873 361 aaKnown RBP15.71■□□□□ 0.11
ATG4D-211ENST00000589753 RPP25Q9BUL9 199 aaKnown RBP15.71■□□□□ 0.11
ATG4D-211ENST00000589753 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.71■□□□□ 0.11
ATG4D-211ENST00000589753 DUS2Q9NX74 493 aaKnown RBP15.71■□□□□ 0.11
ATG4D-211ENST00000589753 DDX56Q9NY93 547 aaKnown RBP15.71■□□□□ 0.11
ATG4D-211ENST00000589753 IGSF9Q9P2J2 1179 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 OR12D3Q9UGF7 316 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 PCDHA3Q9Y5H8 950 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 SNX10Q9Y5X0 201 aa15.71■□□□□ 0.11
ATG4D-211ENST00000589753 EYSQ5T1H1 3165 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 CCDC66A2RUB6 948 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 F5H5T6 163 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 SLC6A4P31645 630 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 GGCXP38435 758 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 GNG11P61952 73 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 AUHQ13825 339 aaKnown RBP15.7■□□□□ 0.1
ATG4D-211ENST00000589753 PDGFRLQ15198 375 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 DPYSL2Q16555 572 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 MEI1Q5TIA1 1274 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 PYROXD2Q8N2H3 581 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 CPXM2Q8N436 756 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 UBL4BQ8N7F7 174 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 KRT35Q92764 455 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 ASB2Q96Q27 587 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 TRMT61BQ9BVS5 477 aaKnown RBP15.7■□□□□ 0.1
ATG4D-211ENST00000589753 MAGEB5Q9BZ81 275 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 LINC00597Q9H2U6 94 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 KCNK12Q9HB15 430 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 KLHL11Q9NVR0 708 aa15.7■□□□□ 0.1
ATG4D-211ENST00000589753 PACSIN2Q9UNF0 486 aaPredicted RBP15.7■□□□□ 0.1
ATG4D-211ENST00000589753 E9PAM4 449 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 FAM72CH0Y354 149 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 CHADO15335 359 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 KRT1P04264 644 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 L1CAMP32004 1257 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 MARCKSL1P49006 195 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 VCPP55072 806 aaKnown RBP15.69■□□□□ 0.1
ATG4D-211ENST00000589753 CDH6P55285 790 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 NRG1Q02297 640 aaPredicted RBP15.69■□□□□ 0.1
ATG4D-211ENST00000589753 ZP2Q05996 745 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 KRT81Q14533 505 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 EML3Q32P44 896 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 ODF2Q5BJF6 829 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 PPP6R3Q5H9R7 873 aaPredicted RBP15.69■□□□□ 0.1
ATG4D-211ENST00000589753 FAM72AQ5TYM5 149 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 FAM72DQ6L9T8 149 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 FBXL22Q6P050 247 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 RFWD3Q6PCD5 774 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 LRRC31Q6UY01 552 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 C14orf80Q86SX3 495 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 FAM72BQ86X60 149 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 KATNAL2Q8IYT4 538 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 LGI2Q8N0V4 545 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 KCTD6Q8NC69 237 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 ASIC4Q96FT7 647 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 HES6Q96HZ4 224 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 ZFYVE19Q96K21 471 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 KCTD15Q96SI1 283 aaPredicted RBP15.69■□□□□ 0.1
ATG4D-211ENST00000589753 EPAS1Q99814 870 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 FAM83CQ9BQN1 747 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms