RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 M0QYT0 321 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 TBL1XO60907 577 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 ALDH1A2O94788 518 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 HNRNPLP14866 589 aaKnown RBP eCLIP17.03■□□□□ 0.32
DNMT1-221ENST00000589538 FNTBP49356 437 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 GSCP56915 257 aaPredicted RBP17.03■□□□□ 0.32
DNMT1-221ENST00000589538 SLC25A52Q3SY17 297 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 BRMS1LQ5PSV4 323 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 NADSYN1Q6IA69 706 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 MMS22LQ6ZRQ5 1243 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 IRF2BP2Q7Z5L9 587 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 SFTPA1Q8IWL2 248 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 ALLCQ8N6M5 410 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 NT5C3BQ969T7 300 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 NPY6RQ99463 290 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 TTYH3Q9C0H2 523 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 POLMQ9NP87 494 aaPredicted RBP17.03■□□□□ 0.32
DNMT1-221ENST00000589538 ADAM22Q9P0K1 906 aa17.03■□□□□ 0.32
DNMT1-221ENST00000589538 SYNJ2BP-COX16A0A087WUM0 186 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 PRR23AA6NEV1 266 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 TRIM24O15164 1050 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 CBFA2T2O43439 604 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 CHRM1P11229 460 aaPredicted RBP17.02■□□□□ 0.32
DNMT1-221ENST00000589538 TNFAIP3P21580 790 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 NTSR1P30989 418 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 HOXD11P31277 338 aaPredicted RBP17.02■□□□□ 0.32
DNMT1-221ENST00000589538 SLC6A4P31645 630 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 PBX1P40424 430 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 PITX1P78337 314 aaPredicted RBP17.02■□□□□ 0.32
DNMT1-221ENST00000589538 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
DNMT1-221ENST00000589538 NME3Q13232 169 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 CRY1Q16526 586 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 MS4A13Q5J8X5 152 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 EMC10Q5UCC4 262 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 TTC39BQ5VTQ0 682 aaPredicted RBP17.02■□□□□ 0.32
DNMT1-221ENST00000589538 RNF43Q68DV7 783 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 RFWD3Q6PCD5 774 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 CHSY1Q86X52 802 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 CCDC33Q8N5R6 958 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 TSTD1Q8NFU3 115 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 SLC30A5Q8TAD4 765 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 HHIPQ96QV1 700 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 PCDHB18PQ96TA0 734 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 C11orf70Q9BRQ4 267 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 EPC1Q9H2F5 836 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 WDCPQ9H6R7 721 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 COX16Q9P0S2 106 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 IFNKQ9P0W0 207 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 TMEM59LQ9UK28 342 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 RAB23Q9ULC3 237 aa17.02■□□□□ 0.32
DNMT1-221ENST00000589538 GOLGA6L7A0A1B0GV03 622 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 PRRT4C9JH25 899 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 F5H5T6 163 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 AXIN1O15169 862 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 ZBTB24O43167 697 aaPredicted RBP17.01■□□□□ 0.31
DNMT1-221ENST00000589538 GFRA3O60609 400 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 TACR2P21452 398 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 PRKCIP41743 596 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 SULT1E1P49888 294 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 DEUP1Q05D60 604 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 KLHL30Q0D2K2 578 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 RABGAP1LQ5R372 815 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 HEATR6Q6AI08 1181 aaKnown RBP17.01■□□□□ 0.31
DNMT1-221ENST00000589538 ALYREFQ86V81 257 aaKnown RBP17.01■□□□□ 0.31
DNMT1-221ENST00000589538 CHPFQ8IZ52 775 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 LGI2Q8N0V4 545 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 AHI1Q8N157 1196 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.01■□□□□ 0.31
DNMT1-221ENST00000589538 SYN2Q92777 582 aaPredicted RBP17.01■□□□□ 0.31
DNMT1-221ENST00000589538 P2RY11Q96G91 374 aa17.01■□□□□ 0.31
DNMT1-221ENST00000589538 METTL5Q9NRN9 209 aaKnown RBP17.01■□□□□ 0.31
DNMT1-221ENST00000589538 BZW2Q9Y6E2 419 aaKnown RBP17.01■□□□□ 0.31
DNMT1-221ENST00000589538 ITIH6Q6UXX5 1313 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 MYO18AQ92614 2054 aaKnown RBP17■□□□□ 0.31
DNMT1-221ENST00000589538 SGK1O00141 431 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 CXCR3P49682 368 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 SGSHP51688 502 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 DMWDQ09019 674 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 PTP4A2Q12974 167 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 GEN1Q17RS7 908 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 C2CD6Q53TS8 623 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 EGFLAMQ63HQ2 1017 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 RAP1GAP2Q684P5 730 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 ACAD10Q6JQN1 1059 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 MFN1Q8IWA4 741 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 C3orf20Q8ND61 904 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 FIBINQ8TAL6 211 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 VCPIP1Q96JH7 1222 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 PRICKLE1Q96MT3 831 aaPredicted RBP17■□□□□ 0.31
DNMT1-221ENST00000589538 SELENOOQ9BVL4 669 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 ELOVL2Q9NXB9 296 aa17■□□□□ 0.31
DNMT1-221ENST00000589538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17■□□□□ 0.316e-8■■□□□ 13
DNMT1-221ENST00000589538 PIEZO1Q92508 2521 aa16.99■□□□□ 0.31
DNMT1-221ENST00000589538 ANKRD62A6NC57 917 aa16.99■□□□□ 0.31
DNMT1-221ENST00000589538 ADAM23O75077 832 aa16.99■□□□□ 0.31
DNMT1-221ENST00000589538 ATP5BP06576 529 aaKnown RBP16.99■□□□□ 0.31
DNMT1-221ENST00000589538 PABPC1P11940 636 aaKnown RBP16.99■□□□□ 0.31
DNMT1-221ENST00000589538 KRT3P12035 628 aa16.99■□□□□ 0.31
DNMT1-221ENST00000589538 HOXB2P14652 356 aa16.99■□□□□ 0.31
DNMT1-221ENST00000589538 PDGFRAP16234 1089 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms