RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ZXDBP98169 803 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 FCHO2Q0JRZ9 810 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 PDGFRLQ15198 375 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 LRRC31Q6UY01 552 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 NYAP1Q6ZVC0 841 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 CYP4V2Q6ZWL3 525 aaPredicted RBP17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 MFSD6LQ8IWD5 586 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 YAF2Q8IY57 180 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 RBM41Q96IZ5 413 aaKnown RBP17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 PEBP4Q96S96 227 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 SMG9Q9H0W8 520 aaKnown RBP17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 PRDM16Q9HAZ2 1276 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 IGSF9Q9P2J2 1179 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 OR12D3Q9UGF7 316 aa17.56■□□□□ 0.4
SCAMP4-211ENST00000588907 PSMC3P17980 439 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 GJC1P36383 396 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 ARL4AP40617 200 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 IFNAR2P48551 515 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 MLLT6P55198 1093 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 COPS2P61201 443 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 HTR4Q13639 388 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 KRT81Q14533 505 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 SMTNL2Q2TAL5 461 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 MS4A13Q5J8X5 152 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 RABGAP1LQ5R372 815 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 DAB2IPQ5VWQ8 1189 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 CHSY1Q86X52 802 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 RCOR2Q8IZ40 523 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 SLC35F6Q8N357 371 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 KCTD6Q8NC69 237 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 EXD1Q8NHP7 514 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 FAM71BQ8TC56 605 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 OSCP1Q8WVF1 389 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 ATXN2LQ8WWM7 1075 aaKnown RBP17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 HSPH1Q92598 858 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 ZNF670Q9BS34 389 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 DHX35Q9H5Z1 703 aaKnown RBP17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 PPARGC1AQ9UBK2 798 aaKnown RBP17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 HYOU1Q9Y4L1 999 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 PRUNE2Q8WUY3 3088 aa17.55■□□□□ 0.4
SCAMP4-211ENST00000588907 CTAGE9A4FU28 777 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 C2CD4DB7Z1M9 353 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 H3BRJ5 948 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 FGF10O15520 208 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 ZRANB2O95218 330 aaKnown RBP eCLIP17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 NFATC1O95644 943 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 KLKB1P03952 638 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 CYBBP04839 570 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 TCF4P15884 667 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 VIPR2P41587 438 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 HCAR3P49019 387 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 RAB6CQ53S08 254 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 KCNT1Q5JUK3 1230 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 PIK3R6Q5UE93 754 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 TANGO2Q6ICL3 276 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 POTEHQ6S545 545 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 C17orf53Q8N3J3 647 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 ZNF557Q8N988 423 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 TTC16Q8NEE8 873 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 ATP2A3Q93084 1043 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 NAPGQ99747 312 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 RAB6CQ9H0N0 254 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 CARD9Q9H257 536 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 STIM2Q9P246 746 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 HS3ST4Q9Y661 456 aa17.54■□□□□ 0.4
SCAMP4-211ENST00000588907 KIF26AQ9ULI4 1882 aaPredicted RBP17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 LRRD1A4D1F6 860 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 CHADO15335 359 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 KRT1P04264 644 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 TNNT1P13805 278 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 TACR2P21452 398 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 CDH6P55285 790 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 TPI1P60174 286 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 SEMA3BQ13214 749 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 AUHQ13825 339 aaKnown RBP17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 FAM133BQ5BKY9 247 aaKnown RBP17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 MPP7Q5T2T1 576 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 VITQ6UXI7 678 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 ADHFE1Q8IWW8 467 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 BBS7Q8IWZ6 715 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 HJURPQ8NCD3 748 aaPredicted RBP17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 TBC1D31Q96DN5 1066 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 RPGRIP1Q96KN7 1286 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 PRMT1Q99873 361 aaKnown RBP17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 TRMT61BQ9BVS5 477 aaKnown RBP17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 SIK2Q9H0K1 926 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 CATSPERBQ9H7T0 1116 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 DUS2Q9NX74 493 aaKnown RBP17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 EFR3BQ9Y2G0 817 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 NUMBLQ9Y6R0 609 aa17.53■□□□□ 0.4
SCAMP4-211ENST00000588907 C5orf42Q9H799 3197 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 IGLV3-10A0A075B6K4 115 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 E9PAM4 449 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 ADH1CP00326 375 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 HOXC13P31276 330 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 PEX5P50542 639 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 TFF2Q03403 129 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 PPP2R5EQ16537 467 aa17.52■□□□□ 0.4
SCAMP4-211ENST00000588907 C5orf22Q49AR2 442 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms