RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 TRIM68Q6AZZ1 485 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 SCYL2Q6P3W7 929 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 ZNF662Q6ZS27 426 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 SLFN11Q7Z7L1 901 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 FAM131BQ86XD5 332 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 DNAAF5Q86Y56 855 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 TMEM25Q86YD3 366 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 RNF10Q8N5U6 811 aaKnown RBP9.39□□□□□ -0.91
CIRBP-218ENST00000588344 ST13P5Q8NFI4 369 aaPredicted RBP9.39□□□□□ -0.91
CIRBP-218ENST00000588344 DDI1Q8WTU0 396 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 ARHGEF26Q96DR7 871 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 ZFYVE19Q96K21 471 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 BBS2Q9BXC9 721 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 PACSIN1Q9BY11 444 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 OSBPL6Q9BZF3 934 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 HPS4Q9NQG7 708 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 ARHGEF3Q9NR81 526 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 GTSE1Q9NYZ3 720 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 PIAS3Q9Y6X2 628 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 NOTCH4Q99466 2003 aa9.39□□□□□ -0.91
CIRBP-218ENST00000588344 A0A0A0MRY4 1105 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 SPECC1L-ADORA2AF8WAN1 911 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 GFRA2O00451 464 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 TRDMT1O14717 391 aaKnown RBP9.38□□□□□ -0.91
CIRBP-218ENST00000588344 TIMM44O43615 452 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 KRT86O43790 486 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 PAGE1O75459 146 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 PENKP01210 267 aaPredicted RBP9.38□□□□□ -0.91
CIRBP-218ENST00000588344 CYP17A1P05093 508 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 CCDC175P0C221 793 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 TYRP14679 529 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 TFE3P19532 575 aaPredicted RBP9.38□□□□□ -0.91
CIRBP-218ENST00000588344 TACR2P21452 398 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 DRD1P21728 446 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 L1CAMP32004 1257 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 CTHP32929 405 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 OGDHQ02218 1023 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 GRSF1Q12849 480 aaKnown RBP eCLIP9.38□□□□□ -0.912e-8■■□□□ 12.5
CIRBP-218ENST00000588344 AUHQ13825 339 aaKnown RBP9.38□□□□□ -0.91
CIRBP-218ENST00000588344 ANO4Q32M45 955 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 C5orf22Q49AR2 442 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 FBXO43Q4G163 708 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 FAM133BQ5BKY9 247 aaKnown RBP9.38□□□□□ -0.91
CIRBP-218ENST00000588344 ERMARDQ5T6L9 678 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 OTUD1Q5VV17 481 aaPredicted RBP9.38□□□□□ -0.91
CIRBP-218ENST00000588344 TRIM67Q6ZTA4 783 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 TPGS1Q6ZTW0 290 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 BMP8AQ7Z5Y6 402 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 CHSY1Q86X52 802 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 SYNPOQ8N3V7 929 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 HJURPQ8NCD3 748 aaPredicted RBP9.38□□□□□ -0.91
CIRBP-218ENST00000588344 KCNV2Q8TDN2 545 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 TEKT4Q8WW24 435 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 FAM3CQ92520 227 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 WBP2Q969T9 261 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 ASIC4Q96FT7 647 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 PRMT1Q99873 361 aaKnown RBP9.38□□□□□ -0.91
CIRBP-218ENST00000588344 HEBP1Q9NRV9 189 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 CALCOCO1Q9P1Z2 691 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 STIM2Q9P246 746 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 DEC1Q9P2X7 70 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 PPARGC1AQ9UBK2 798 aaKnown RBP9.38□□□□□ -0.91
CIRBP-218ENST00000588344 OR12D3Q9UGF7 316 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 USP18Q9UMW8 372 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 ADGRG1Q9Y653 693 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 HS3ST4Q9Y661 456 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 VCANP13611 3396 aa9.38□□□□□ -0.91
CIRBP-218ENST00000588344 C2orf16Q68DN1 1984 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 DENND4AQ7Z401 1863 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 KANSL1LA0AUZ9 987 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 DRGXA6NNA5 263 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 NEDD8-MDP1E9PL57 170 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 CACNG3O60359 315 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 LRCH4O75427 683 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 CLDN11O75508 207 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 KRT7P08729 469 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 MIPP30301 263 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 GRIA2P42262 883 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 MAGEA9P43362 315 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 HCAR3P49019 387 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 CLCN5P51795 746 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 NAP1L1P55209 391 aaKnown RBP9.37□□□□□ -0.91
CIRBP-218ENST00000588344 CCZ1BP86790 482 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 CCZ1P86791 482 aaPredicted RBP9.37□□□□□ -0.91
CIRBP-218ENST00000588344 SLC12A1Q13621 1099 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 MESDQ14696 234 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 DGKKQ5KSL6 1271 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 SH3PXD2AQ5TCZ1 1133 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 LRRC38Q5VT99 294 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 FYB2Q5VWT5 728 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 RAP1GAP2Q684P5 730 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 NADSYN1Q6IA69 706 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 TPRG1Q6ZUI0 275 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 POLNQ7Z5Q5 900 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 MAP7D3Q8IWC1 876 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 SYCE1Q8N0S2 351 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 LGI2Q8N0V4 545 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 SIX5Q8N196 739 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 CD101Q93033 1021 aa9.37□□□□□ -0.91
CIRBP-218ENST00000588344 RPRD1AQ96P16 312 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms