RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 SCD5Q86SK9 330 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 LRRC49Q8IUZ0 686 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 TTC9BQ8N6N2 239 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 KREMEN2Q8NCW0 462 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 GPR152Q8TDT2 470 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 CASP10Q92851 521 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 C1orf74Q96LT6 269 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 PPP1R2P1Q96PQ5 205 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 KLHL5Q96PQ7 755 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 KCTD15Q96SI1 283 aaPredicted RBP13.11□□□□□ -0.31
TMED1-204ENST00000588289 RUFY1Q96T51 708 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 PCDH9Q9HC56 1237 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 ASAH2Q9NR71 780 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 GPATCH2LQ9NWQ4 482 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 HEY1Q9Y5J3 304 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 DOCK4Q8N1I0 1966 aa13.11□□□□□ -0.31
TMED1-204ENST00000588289 SOBPA7XYQ1 873 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 KCNU1A8MYU2 1149 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 ADAM12O43184 909 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 LILRB3O75022 631 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 SOAT2O75908 522 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 SEC24AO95486 1093 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 LATS1O95835 1130 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 KRT14P02533 472 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 C8AP07357 584 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 CD48P09326 243 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 HNRNPA1P09651 372 aaKnown RBP eCLIP13.1□□□□□ -0.31
TMED1-204ENST00000588289 TFE3P19532 575 aaPredicted RBP13.1□□□□□ -0.31
TMED1-204ENST00000588289 ERVK-21P61565 698 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 USP46P62068 366 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 ZNF33AQ06730 810 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 GPM6BQ13491 265 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 SLMAPQ14BN4 828 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 LLGL1Q15334 1064 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 RABGAP1LQ5R372 815 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 HEATR6Q6AI08 1181 aaKnown RBP13.1□□□□□ -0.31
TMED1-204ENST00000588289 FBXO38Q6PIJ6 1188 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 PPP1R21Q6ZMI0 780 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 DNAJB7Q7Z6W7 309 aaPredicted RBP13.1□□□□□ -0.31
TMED1-204ENST00000588289 DDX42Q86XP3 938 aaKnown RBP eCLIP13.1□□□□□ -0.31
TMED1-204ENST00000588289 MIB1Q86YT6 1006 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 CCDC117Q8IWD4 279 aaPredicted RBP13.1□□□□□ -0.31
TMED1-204ENST00000588289 ALLCQ8N6M5 410 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 PLD5Q8N7P1 536 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 SPPL3Q8TCT6 385 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 TFB1MQ8WVM0 346 aaKnown RBP13.1□□□□□ -0.31
TMED1-204ENST00000588289 PNKPQ96T60 521 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 FMO2Q99518 471 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 NMUR1Q9HB89 426 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 CWC15Q9P013 229 aaKnown RBP13.1□□□□□ -0.31
TMED1-204ENST00000588289 PAK5Q9P286 719 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 SFMBT1Q9UHJ3 866 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 LSM7Q9UK45 103 aaKnown RBP13.1□□□□□ -0.31
TMED1-204ENST00000588289 ZNF510Q9Y2H8 683 aa13.1□□□□□ -0.31
TMED1-204ENST00000588289 HELZP42694 1942 aaKnown RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 TCRBV7S2A1N4TA0A589 114 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 GOLGA6CA6NDK9 693 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 GOLGA6BA6NDN3 693 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 ZNF840PA6NDX5 716 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 NEBLO76041 1014 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 VNN2O95498 520 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 IFNB1P01574 187 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 CA3P07451 260 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 GOLGA6DP0CG33 693 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 GOT1P17174 413 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 CLCN6P51797 869 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 MMRN1Q13201 1228 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 NAA30Q147X3 362 aaPredicted RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 TTC39BQ5VTQ0 682 aaPredicted RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 OTUD1Q5VV17 481 aaPredicted RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 TIGD7Q6NT04 549 aaPredicted RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 RWDD4Q6NW29 188 aaKnown RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 C1orf228Q6PIY5 440 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 PCDH19Q8TAB3 1148 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 SLC35B2Q8TB61 432 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 NSMCE1Q8WV22 266 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 AUTS2Q8WXX7 1259 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 SEC14L1Q92503 715 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 CAVIN3Q969G5 261 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 AZIN2Q96A70 460 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 LRCH3Q96II8 777 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 CDCA3Q99618 268 aaPredicted RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 FRMD8Q9BZ67 464 aaPredicted RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 KLC2Q9H0B6 622 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 DPH5Q9H2P9 285 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 CRISPLD1Q9H336 500 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 SLC28A3Q9HAS3 691 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 ALG13Q9NP73 1137 aaKnown RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 ARHGEF4Q9NR80 690 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 GOLGA6AQ9NYA3 693 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 PPARGC1AQ9UBK2 798 aaKnown RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 DMGDHQ9UI17 866 aaKnown RBP13.09□□□□□ -0.31
TMED1-204ENST00000588289 DNPEPQ9ULA0 475 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 SHROOM3Q8TF72 1996 aa13.09□□□□□ -0.31
TMED1-204ENST00000588289 TRAV19A0A0A6YYK7 116 aa13.08□□□□□ -0.32
TMED1-204ENST00000588289 BCLAF3A2AJT9 711 aaKnown RBP13.08□□□□□ -0.32
TMED1-204ENST00000588289 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
TMED1-204ENST00000588289 F5H5T6 163 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms