RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 RPL17P18621 184 aaKnown RBP15.15■□□□□ 0.02
CCDC43-203ENST00000588210 KRT15P19012 456 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 MYL6P60660 151 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 SGSM1Q2NKQ1 1148 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 CTXN3Q4LDR2 81 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 SLC8B1Q6J4K2 584 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 TMEM86AQ8N2M4 240 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 KIF2BQ8N4N8 673 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 TOP6BLQ8N6T0 577 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 GPATCH11Q8N954 259 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 AGAP11Q8TF27 550 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 SLC22A17Q8WUG5 538 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 CASP10Q92851 521 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 PAIP2Q9BPZ3 127 aaKnown RBP15.15■□□□□ 0.02
CCDC43-203ENST00000588210 XYLT2Q9H1B5 865 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 STRIP2Q9ULQ0 834 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 PHTF1Q9UMS5 762 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 CDY1Q9Y6F8 540 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 USH1CQ9Y6N9 552 aa15.15■□□□□ 0.02
CCDC43-203ENST00000588210 C3orf70A6NLC5 250 aaPredicted RBP15.14■□□□□ 0.01
CCDC43-203ENST00000588210 SGK1O00141 431 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 LINC01565O15544 149 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 TYROBPO43914 113 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 EDF1O60869 148 aaKnown RBP15.14■□□□□ 0.01
CCDC43-203ENST00000588210 ATP5HO75947 161 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 OR1D2P34982 312 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 MSH2P43246 934 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 PDIA2Q13087 525 aaKnown RBP15.14■□□□□ 0.01
CCDC43-203ENST00000588210 DNAJC3Q13217 504 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 RAB33AQ14088 237 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 HIF1AQ16665 826 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 ERICH1Q86X53 443 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 WDTC1Q8N5D0 677 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 SPATA18Q8TC71 538 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 ACSF2Q96CM8 615 aaPredicted RBP15.14■□□□□ 0.01
CCDC43-203ENST00000588210 HAUS1Q96CS2 278 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 STAMBPL1Q96FJ0 436 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 TMEM121Q9BTD3 319 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 UBE2ZQ9H832 354 aaPredicted RBP15.14■□□□□ 0.01
CCDC43-203ENST00000588210 KIF9Q9HAQ2 790 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 DPP7Q9UHL4 492 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 CEP83Q9Y592 693 aa15.14■□□□□ 0.01
CCDC43-203ENST00000588210 WFS1O76024 890 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 GLP2RO95838 553 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 GLUD1P00367 558 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 CCND1P24385 295 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 SLC25A11Q02978 314 aaKnown RBP15.13■□□□□ 0.01
CCDC43-203ENST00000588210 PDE4CQ08493 712 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 TAZQ16635 292 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 ZNF699Q32M78 642 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 WSCD1Q658N2 575 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 RSPO2Q6UXX9 243 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-203ENST00000588210 EP400NLQ6ZTU2 488 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 THEM5Q8N1Q8 247 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 VN1R2Q8NFZ6 395 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 N4BP2L2Q92802 583 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-203ENST00000588210 RAB3IPQ96QF0 476 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-203ENST00000588210 MYLK2Q9H1R3 596 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 GRID1Q9ULK0 1009 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 CLUHO75153 1309 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 PRUNE2Q8WUY3 3088 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 OR6C75A6NL08 312 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 TGM5O43548 720 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 FAM163BP0C2L3 166 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 EPCAMP16422 314 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 CA4P22748 312 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 PHBP35232 272 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 RPA3P35244 121 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-203ENST00000588210 LTBRP36941 435 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 GPX6P59796 221 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 SETDB1Q15047 1291 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 ACCSLQ4AC99 568 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 ZC3H12AQ5D1E8 599 aaKnown RBP15.13■□□□□ 0.01
CCDC43-203ENST00000588210 LILRA6Q6PI73 481 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 BBS12Q6ZW61 710 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 LIMS2Q7Z4I7 341 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 PPIL6Q8IXY8 311 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 C4orf33Q8N1A6 199 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 TTC13Q8NBP0 860 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 LRRC8CQ8TDW0 803 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 FNIP1Q8TF40 1166 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 TFAP2BQ92481 460 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 DHRS4Q9BTZ2 278 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 LRMDAQ9H2I8 198 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 NOP53Q9NZM5 478 aaKnown RBP15.13■□□□□ 0.01
CCDC43-203ENST00000588210 C15orf41Q9Y2V0 281 aa15.13■□□□□ 0.01
CCDC43-203ENST00000588210 ADAM12O43184 909 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 TBX10O75333 385 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 DCTN3O75935 186 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 KRT7P08729 469 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 ASPAP45381 313 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 GEMIN4P57678 1058 aaKnown RBP15.12■□□□□ 0.01
CCDC43-203ENST00000588210 SOWAHAQ2M3V2 549 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 PARP6Q2NL67 630 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 ZNF667Q5HYK9 610 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 SPDYAQ5MJ70 313 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 HP1BP3Q5SSJ5 553 aaPredicted RBP15.12■□□□□ 0.01
CCDC43-203ENST00000588210 CYP4A22Q5TCH4 519 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 ELMSAN1Q6PJG2 1045 aa15.12■□□□□ 0.01
CCDC43-203ENST00000588210 ATP11CQ8NB49 1132 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms