RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 DDX47Q9H0S4 455 aaKnown RBP11.7□□□□□ -0.54
VMP1-207ENST00000588131 DZANK1Q9NVP4 752 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 TMEM51Q9NW97 253 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.7□□□□□ -0.54
VMP1-207ENST00000588131 NEU3Q9UQ49 428 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 EFR3BQ9Y2G0 817 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 MFHAS1Q9Y4C4 1052 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 CPQQ9Y646 472 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 V9GYY5 206 aaPredicted RBP11.7□□□□□ -0.54
VMP1-207ENST00000588131 DOCK6Q96HP0 2047 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 C2orf16Q68DN1 1984 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 HELZP42694 1942 aaKnown RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 TMEM265A0A087WTH1 108 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 TRAV19A0A0A6YYK7 116 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 GOLGA6L7A0A1B0GV03 622 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 ZNF487B1APH4 448 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 CCDC188H7C350 402 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 EEF2KO00418 725 aaKnown RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 PHF2O75151 1096 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 LRIG2O94898 1065 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 TJP3O95049 919 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 FGF19O95750 216 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 KLKB1P03952 638 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 PECAM1P16284 738 aaPredicted RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 CEBPBP17676 345 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 ARL4AP40617 200 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 KPNA1P52294 538 aaPredicted RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 TPI1P60174 286 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 MRPS25P82663 173 aaKnown RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 ZXDBP98169 803 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 DPYSQ14117 519 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 TFDP2Q14188 446 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 ADGRE1Q14246 886 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 CYP1B1Q16678 543 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 KCTD19Q17RG1 926 aaPredicted RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 MS4A13Q5J8X5 152 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 TEX35Q5T0J7 233 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 MANEALQ5VSG8 457 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 RAP1GAP2Q684P5 730 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 NUGGCQ68CJ6 796 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 SLC9A4Q6AI14 798 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 NADSYN1Q6IA69 706 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 ANKRD54Q6NXT1 300 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 NPNTQ6UXI9 565 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 RFX8Q6ZV50 586 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 ZNF683Q8IZ20 524 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 MMGT1Q8N4V1 131 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 PLD5Q8N7P1 536 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 EFHBQ8N7U6 833 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 ATP6V0D2Q8N8Y2 350 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 LEMD2Q8NC56 503 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 MYRIPQ8NFW9 859 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 MAIP1Q8WWC4 291 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 PLD4Q96BZ4 506 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 RPGRIP1Q96KN7 1286 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 BTN2A3PQ96KV6 586 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 KRT12Q99456 494 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 MAK16Q9BXY0 300 aaKnown RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 DCLK3Q9C098 648 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 SMG9Q9H0W8 520 aaKnown RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 PIDD1Q9HB75 910 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 ARHGEF4Q9NR80 690 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 ETNK2Q9NVF9 386 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 RCOR3Q9P2K3 495 aaPredicted RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 SAE1Q9UBE0 346 aaPredicted RBP11.69□□□□□ -0.54
VMP1-207ENST00000588131 OR12D3Q9UGF7 316 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 CDH22Q9UJ99 828 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 MTCH2Q9Y6C9 303 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 CHD7Q9P2D1 2997 aa11.69□□□□□ -0.54
VMP1-207ENST00000588131 GOLGA6L10A0A0M3HER8 536 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 EFCAB8A8MWE9 144 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 E9PAM4 449 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 APOL1O14791 398 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 GREM1O60565 184 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 CKMP06732 381 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 SRGAP2BP0DMP2 458 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 CORO1AP31146 461 aaKnown RBP11.68□□□□□ -0.54
VMP1-207ENST00000588131 IRAK1P51617 712 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 MLLT6P55198 1093 aaPredicted RBP11.68□□□□□ -0.54
VMP1-207ENST00000588131 SLC7A9P82251 487 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 COG7P83436 770 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 OTUD4Q01804 1114 aaKnown RBP11.68□□□□□ -0.54
VMP1-207ENST00000588131 ADAM15Q13444 863 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 SNX1Q13596 522 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 AUHQ13825 339 aaKnown RBP11.68□□□□□ -0.54
VMP1-207ENST00000588131 NAA30Q147X3 362 aaPredicted RBP11.68□□□□□ -0.54
VMP1-207ENST00000588131 ARHGAP15Q53QZ3 475 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 NCBP2-AS2Q69YL0 99 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 TTC27Q6P3X3 843 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 SYCE2Q6PIF2 218 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 C1orf228Q6PIY5 440 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 DENND1CQ8IV53 801 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 UNC45BQ8IWX7 931 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 C12orf50Q8NA57 414 aaPredicted RBP11.68□□□□□ -0.54
VMP1-207ENST00000588131 ITFG1Q8TB96 612 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 ING5Q8WYH8 240 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 MAGOHBQ96A72 148 aaKnown RBP11.68□□□□□ -0.54
VMP1-207ENST00000588131 MYEOVQ96EZ4 313 aa11.68□□□□□ -0.54
VMP1-207ENST00000588131 EPAS1Q99814 870 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms