RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 RAB6BQ9NRW1 208 aa9.08□□□□□ -0.96
NEDD4L-221ENST00000588066 CLIC5Q9NZA1 410 aa9.08□□□□□ -0.96
NEDD4L-221ENST00000588066 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.08□□□□□ -0.96
NEDD4L-221ENST00000588066 FNIP2Q9P278 1114 aa9.08□□□□□ -0.96
NEDD4L-221ENST00000588066 HSFX1Q9UBD0 423 aa9.08□□□□□ -0.96
NEDD4L-221ENST00000588066 FETUBQ9UGM5 382 aa9.08□□□□□ -0.96
NEDD4L-221ENST00000588066 TBX21Q9UL17 535 aa9.08□□□□□ -0.96
NEDD4L-221ENST00000588066 TANC1Q9C0D5 1861 aa9.08□□□□□ -0.96
NEDD4L-221ENST00000588066 TTC3P53804 2025 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 E7ESA3 106 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 AP3B1O00203 1094 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 TP73O15350 636 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 IRAK2O43187 625 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 B4GALT3O60512 393 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 IGLV3-25P01717 112 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 APOEP02649 317 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 SHBGP04278 402 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 OR4Q2P0C623 313 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 HAPLN1P10915 354 aaPredicted RBP9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 ERCC2P18074 760 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 LAG3P18627 525 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 MAGEA6P43360 314 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 GJA8P48165 433 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 GDF10P55107 478 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 ARPP19P56211 112 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 MAGOHP61326 146 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 NRG1Q02297 640 aaPredicted RBP9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 GBE1Q04446 702 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 IFRD2Q12894 506 aaPredicted RBP9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 SEMA3BQ13214 749 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 DPYSQ14117 519 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 RASA2Q15283 850 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 BBS9Q3SYG4 887 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 CCDC38Q502W7 563 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 SPOUT1Q5T280 376 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 ITPRIPL1Q6GPH6 555 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 LRRC31Q6UY01 552 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 DENND5BQ6ZUT9 1274 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 BHLHA9Q7RTU4 235 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 PRUNE1Q86TP1 453 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 LRRC49Q8IUZ0 686 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 CMTR2Q8IYT2 770 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 ZBED8Q8IZ13 594 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 CRIPAKQ8N1N5 446 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 TMEM199Q8N511 208 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 ATP6V0D2Q8N8Y2 350 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 GLIS1Q8NBF1 620 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 CCNYQ8ND76 341 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 PDZD8Q8NEN9 1154 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 FBXO32Q969P5 355 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 TLCD1Q96CP7 247 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 ZNF333Q96JL9 665 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 C9orf72Q96LT7 481 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 ZNF558Q96NG5 402 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 OLFM3Q96PB7 478 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 GPR62Q9BZJ7 368 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 EIF2B3Q9NR50 452 aaKnown RBP9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 TMEM30AQ9NV96 361 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 ETNK2Q9NVF9 386 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 MARCH5Q9NX47 278 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 ARHGEF38Q9NXL2 777 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 IL37Q9NZH6 218 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 DTLQ9NZJ0 730 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 SENP1Q9P0U3 644 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 MTRRQ9UBK8 725 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 OR12D3Q9UGF7 316 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 SLC24A2Q9UI40 661 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 TRHDEQ9UKU6 1024 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 MAFFQ9ULX9 164 aa9.07□□□□□ -0.96
NEDD4L-221ENST00000588066 PATJQ8NI35 1801 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 EXOC1LA0A1B0GW35 172 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 MTMR11A4FU01 709 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 SMIM23A6NLE4 172 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 ERI2A8K979 691 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 F8W810 466 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 DCLK1O15075 740 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 BAIAP3O94812 1187 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 MLNP12872 115 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 EPHB2P29323 1055 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 HPDP32754 393 aaPredicted RBP9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 MDH1P40925 334 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 GATMP50440 423 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 GYS2P54840 703 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 TBX4P57082 545 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 GNGT1P63211 74 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 PITX1P78337 314 aaPredicted RBP9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 CREMQ03060 361 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 AP1B1Q10567 949 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 SEMA5AQ13591 1074 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 AUHQ13825 339 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 PRPSAP1Q14558 356 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 KCNJ11Q14654 390 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 PRKD1Q15139 912 aaPredicted RBP9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 PSMD5Q16401 504 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 DDR2Q16832 855 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 SKIDA1Q1XH10 827 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 PARP6Q2NL67 630 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 MGAT5BQ3V5L5 792 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 TPGS2Q68CL5 300 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 NECAB2Q7Z6G3 386 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms