RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 HNRNPLP14866 589 aaKnown RBP eCLIP10.48□□□□□ -0.73
TPM4-207ENST00000588032 HOXD9P28356 352 aaPredicted RBP10.48□□□□□ -0.73
TPM4-207ENST00000588032 TIE1P35590 1138 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 PRKCIP41743 596 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 MESP2Q0VG99 397 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 CRY1Q16526 586 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 MS4A13Q5J8X5 152 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 BRMS1LQ5PSV4 323 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 RNF43Q68DV7 783 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 ACAD10Q6JQN1 1059 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 PKN3Q6P5Z2 889 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 MMS22LQ6ZRQ5 1243 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 ANKS1BQ7Z6G8 1248 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 WDR5BQ86VZ2 330 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 ALLCQ8N6M5 410 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 ZNF513Q8N8E2 541 aaPredicted RBP10.48□□□□□ -0.73
TPM4-207ENST00000588032 IL17RCQ8NAC3 791 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 HJURPQ8NCD3 748 aaPredicted RBP10.48□□□□□ -0.73
TPM4-207ENST00000588032 SLC30A5Q8TAD4 765 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 WFIKKN2Q8TEU8 576 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 DCBLD2Q96PD2 775 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 WDCPQ9H6R7 721 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 POLMQ9NP87 494 aaPredicted RBP10.48□□□□□ -0.73
TPM4-207ENST00000588032 SEPT11Q9NVA2 429 aaKnown RBP10.48□□□□□ -0.73
TPM4-207ENST00000588032 ADAM22Q9P0K1 906 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 CAPN11Q9UMQ6 739 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.48□□□□□ -0.731e-6■□□□□ 10
TPM4-207ENST00000588032 GOLGA6L7A0A1B0GV03 622 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 F5H5T6 163 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 GOLGA8SH3BPF8 625 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 TRIM24O15164 1050 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 ZBTB24O43167 697 aaPredicted RBP10.47□□□□□ -0.73
TPM4-207ENST00000588032 TBL1XO60907 577 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 ALDH1A2O94788 518 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 KLF8O95600 359 aaPredicted RBP10.47□□□□□ -0.73
TPM4-207ENST00000588032 MOCS2O96007 188 aaPredicted RBP10.47□□□□□ -0.73
TPM4-207ENST00000588032 LMNAP02545 664 aaKnown RBP10.47□□□□□ -0.73
TPM4-207ENST00000588032 CHRM1P11229 460 aaPredicted RBP10.47□□□□□ -0.73
TPM4-207ENST00000588032 KRT3P12035 628 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 GZMAP12544 262 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 NTSR1P30989 418 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 SLC6A4P31645 630 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 CXCR3P49682 368 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 SULT1E1P49888 294 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 PITX1P78337 314 aaPredicted RBP10.47□□□□□ -0.73
TPM4-207ENST00000588032 ZBED6P86452 979 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 DEUP1Q05D60 604 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 KLHL30Q0D2K2 578 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 PTP4A2Q12974 167 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 NME3Q13232 169 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 EMC10Q5UCC4 262 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 TTC39BQ5VTQ0 682 aaPredicted RBP10.47□□□□□ -0.73
TPM4-207ENST00000588032 NADSYN1Q6IA69 706 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 RFWD3Q6PCD5 774 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 KIAA0907Q7Z7F0 614 aaPredicted RBP10.47□□□□□ -0.73
TPM4-207ENST00000588032 CCDC33Q8N5R6 958 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.47□□□□□ -0.73
TPM4-207ENST00000588032 TXNDC5Q8NBS9 432 aaKnown RBP10.47□□□□□ -0.73
TPM4-207ENST00000588032 C3orf20Q8ND61 904 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 TSTD1Q8NFU3 115 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 FIBINQ8TAL6 211 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 PPP1R9BQ96SB3 815 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 C11orf70Q9BRQ4 267 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 SYT11Q9BT88 431 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 HAUS4Q9H6D7 363 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 C2orf42Q9NWW7 574 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 ELOVL2Q9NXB9 296 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 LUC7L2Q9Y383 392 aaKnown RBP10.47□□□□□ -0.73
TPM4-207ENST00000588032 R4GN57 208 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 ITIH6Q6UXX5 1313 aa10.47□□□□□ -0.73
TPM4-207ENST00000588032 SYNJ2BP-COX16A0A087WUM0 186 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 ANKRD62A6NC57 917 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 SIGLEC16A6NMB1 481 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 PRRT4C9JH25 899 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 SGK1O00141 431 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 AXIN1O15169 862 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 ENDOD1O94919 500 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 ATP5BP06576 529 aaKnown RBP10.46□□□□□ -0.73
TPM4-207ENST00000588032 PDGFRAP16234 1089 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 DESP17661 470 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 TACR2P21452 398 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 HLA-FP30511 346 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 SDC4P31431 198 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 RDXP35241 583 aaKnown RBP10.46□□□□□ -0.73
TPM4-207ENST00000588032 FLT3P36888 993 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 PTPN9P43378 593 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 FNTBP49356 437 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 MRE11P49959 708 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 OXCT1P55809 520 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 TRIM14Q14142 442 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 GEN1Q17RS7 908 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 C2CD6Q53TS8 623 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 RABGAP1LQ5R372 815 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 MON1BQ7L1V2 547 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 BNIPLQ7Z465 357 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 VPS36Q86VN1 386 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 CHSY1Q86X52 802 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 MFN1Q8IWA4 741 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 SFTPA1Q8IWL2 248 aa10.46□□□□□ -0.73
TPM4-207ENST00000588032 CHPFQ8IZ52 775 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms