RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 ASIC3Q9UHC3 531 aa9.96□□□□□ -0.81
LINC01539-201ENST00000587904 NOD1Q9Y239 953 aa9.96□□□□□ -0.81
LINC01539-201ENST00000587904 PTPN22Q9Y2R2 807 aa9.96□□□□□ -0.81
LINC01539-201ENST00000587904 NME7Q9Y5B8 376 aa9.96□□□□□ -0.81
LINC01539-201ENST00000587904 USH1CQ9Y6N9 552 aa9.96□□□□□ -0.81
LINC01539-201ENST00000587904 PCNTO95613 3336 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 C3orf70A6NLC5 250 aaPredicted RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 PI4K2BG5E9Z4 385 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 LIASO43766 372 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 PDE5AO76074 875 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 PIM1P11309 404 aaPredicted RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 FGFR1P11362 822 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ATF2P15336 505 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 CHN1P15882 459 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 KCNJ1P48048 391 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ACLYP53396 1101 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 EMP3P54852 163 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 CSE1LP55060 971 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 DMPKQ09013 629 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 DEPDC1Q5TB30 811 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 RNF43Q68DV7 783 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 PMF1Q6P1K2 205 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 BBS12Q6ZW61 710 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ZC3H18Q86VM9 953 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 NUP93Q8N1F7 819 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 EMC1Q8N766 993 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 B3GALNT2Q8NCR0 500 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 CMASQ8NFW8 434 aaPredicted RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ATG4AQ8WYN0 398 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 NKD2Q969F2 451 aaPredicted RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 SRPK1Q96SB4 655 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 TBCBQ99426 244 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 DDX23Q9BUQ8 820 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 PARVBQ9HBI1 364 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 GOLGA2P5Q9HBQ8 144 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 USP18Q9UMW8 372 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 DRG1Q9Y295 367 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ZNF711Q9Y462 761 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ARL5CA6NH57 179 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 SPECC1L-ADORA2AF8WAN1 911 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 CYB561D2O14569 222 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 GABRDO14764 452 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 XPO1O14980 1071 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 TRUB2O95900 331 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ITGAVP06756 1048 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 NUDT17P0C025 328 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 PDGFRAP16234 1089 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 KDELR1P24390 212 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 MIPP30301 263 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 SDC4P31431 198 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 PTPN9P43378 593 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 LHX1P48742 406 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 PRMT2P55345 433 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 AP1B1Q10567 949 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ZBTB17Q13105 803 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 DSC3Q14574 896 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 TRIM71Q2Q1W2 868 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 B3GNT6Q6ZMB0 384 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 SLC26A9Q7LBE3 791 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 BPHLQ86WA6 291 aaPredicted RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 WDR75Q8IWA0 830 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ZBED8Q8IZ13 594 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ARFGAP1Q8N6T3 406 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 FAM13CQ8NE31 585 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 RAET1EQ8TD07 263 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 UBLCP1Q8WVY7 318 aaPredicted RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 RXFP2Q8WXD0 754 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 SCG3Q8WXD2 468 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 VPS50Q96JG6 964 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 ZFP42Q96MM3 310 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 GLT1D1Q96MS3 346 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 SEZ6LQ9BYH1 1024 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 FOXP3Q9BZS1 431 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 PABPC3Q9H361 631 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 DPEP3Q9H4B8 488 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 AGO3Q9H9G7 860 aaKnown RBP9.95□□□□□ -0.82
LINC01539-201ENST00000587904 RSAD1Q9HA92 442 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 KLHL11Q9NVR0 708 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 PADI3Q9ULW8 664 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 NEU2Q9Y3R4 380 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 HEY1Q9Y5J3 304 aa9.95□□□□□ -0.82
LINC01539-201ENST00000587904 A0A0U1RQF3 1178 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 ZNF487B1APH4 448 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 E9PBE3 544 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 BOLA2-SMG1P6H3BVE0 249 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 PAPSS1O43252 624 aaPredicted RBP9.94□□□□□ -0.82
LINC01539-201ENST00000587904 PRPSAP2O60256 369 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 IL1R2P27930 398 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 RGS7P49802 495 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 VCPP55072 806 aaKnown RBP9.94□□□□□ -0.82
LINC01539-201ENST00000587904 CAP1Q01518 475 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 LPIN1Q14693 890 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 ATP13A4Q4VNC1 1196 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 BOLA3Q53S33 107 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 SNX30Q5VWJ9 437 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 TXNRD3NBQ6F5E7 133 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 BBS5Q8N3I7 341 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 SLAIN1Q8ND83 568 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 GSTCDQ8NEC7 633 aa9.94□□□□□ -0.82
LINC01539-201ENST00000587904 CD99L2Q8TCZ2 262 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms