RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 RBM15Q96T37 977 aaKnown RBP eCLIP20.5■□□□□ 0.874e-7■■□□□ 14.5
TRIM47-204ENST00000587339 MCOLN1Q9GZU1 580 aa20.5■□□□□ 0.87
TRIM47-204ENST00000587339 SIK2Q9H0K1 926 aa20.5■□□□□ 0.87
TRIM47-204ENST00000587339 PAK5Q9P286 719 aa20.5■□□□□ 0.87
TRIM47-204ENST00000587339 TLR6Q9Y2C9 796 aa20.5■□□□□ 0.87
TRIM47-204ENST00000587339 GOLGA6L10A6NI86 522 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 SLC38A8A6NNN8 435 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 HACD1B0YJ81 288 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 GOLGA8KD6RF30 607 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 NUDT17P0C025 328 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 FPGSQ05932 587 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 IFFO1Q0D2I5 559 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 TPGS2Q68CL5 300 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 HOOK3Q86VS8 718 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 VPS52Q8N1B4 723 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 PRCCQ92733 491 aaPredicted RBP20.49■□□□□ 0.87
TRIM47-204ENST00000587339 BADQ92934 168 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 OLA1Q9NTK5 396 aaKnown RBP20.49■□□□□ 0.87
TRIM47-204ENST00000587339 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.49■□□□□ 0.87
TRIM47-204ENST00000587339 VPS18Q9P253 973 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 MAGED2Q9UNF1 606 aaPredicted RBP20.49■□□□□ 0.87
TRIM47-204ENST00000587339 SNX10Q9Y5X0 201 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 PAGE1O75459 146 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 ABLIM3O94929 683 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 GJB5O95377 273 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 ZNF844Q08AG5 666 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 RASIP1Q5U651 963 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 NAT8LQ8N9F0 302 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 HSFX1Q9UBD0 423 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 PCDHB12Q9Y5F1 795 aa20.49■□□□□ 0.87
TRIM47-204ENST00000587339 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.48■□□□□ 0.87
TRIM47-204ENST00000587339 SMAPO00193 183 aa20.48■□□□□ 0.87
TRIM47-204ENST00000587339 SRGAP2BP0DMP2 458 aa20.48■□□□□ 0.87
TRIM47-204ENST00000587339 SLC2A3P11169 496 aa20.48■□□□□ 0.87
TRIM47-204ENST00000587339 DNAJB2P25686 324 aa20.48■□□□□ 0.87
TRIM47-204ENST00000587339 EFEMP1Q12805 493 aa20.48■□□□□ 0.87
TRIM47-204ENST00000587339 PDK1Q15118 436 aa20.48■□□□□ 0.87
TRIM47-204ENST00000587339 RELL1Q8IUW5 271 aa20.48■□□□□ 0.87
TRIM47-204ENST00000587339 LGMNQ99538 433 aa20.48■□□□□ 0.87
TRIM47-204ENST00000587339 PPP1R12AO14974 1030 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-204ENST00000587339 MOCS2O96007 188 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-204ENST00000587339 MYZAPP0CAP1 466 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 TBX4P57082 545 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 CCNYQ8ND76 341 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 HTR3CQ8WXA8 447 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 ARL8AQ96BM9 186 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 FERMT1Q9BQL6 677 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 ZBED2Q9BTP6 218 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 TTLL2Q9BWV7 592 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 CYP4F11Q9HBI6 524 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 RAB6BQ9NRW1 208 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 MRPL17Q9NRX2 175 aaKnown RBP20.47■□□□□ 0.87
TRIM47-204ENST00000587339 KCNU1A8MYU2 1149 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 GOLGA8MH3BSY2 632 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 SEC24AO95486 1093 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 ACSL3O95573 720 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 TTC4O95801 387 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 TBX18O95935 607 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 SERPINB6P35237 376 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 AP1B1Q10567 949 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 C10orf120Q5SQS8 335 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 UBAP2Q5T6F2 1119 aaKnown RBP20.47■□□□□ 0.87
TRIM47-204ENST00000587339 ANKRD22Q5VYY1 191 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 RWDD4Q6NW29 188 aaKnown RBP20.47■□□□□ 0.87
TRIM47-204ENST00000587339 C4orf22Q6V702 233 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 FIBCD1Q8N539 461 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 NETO2Q8NC67 525 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 CCDC110Q8TBZ0 833 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 SLC39A13Q96H72 371 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 FCRL2Q96LA5 508 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-204ENST00000587339 UBE2OQ9C0C9 1292 aaKnown RBP20.47■□□□□ 0.87
TRIM47-204ENST00000587339 PRDM12Q9H4Q4 367 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 RAD54BQ9Y620 910 aa20.47■□□□□ 0.87
TRIM47-204ENST00000587339 NCAM2O15394 837 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 GCATO75600 419 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 SHBGP04278 402 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 ZDHHC11BP0C7U3 371 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 HTRA4P83105 476 aaPredicted RBP20.46■□□□□ 0.87
TRIM47-204ENST00000587339 RAB33AQ14088 237 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 HIF1AQ16665 826 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 KYNUQ16719 465 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 TTMPQ5BVD1 217 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 FAM182AQ5T1J6 154 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 CENPUQ71F23 418 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 MIB1Q86YT6 1006 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 AUTS2Q8WXX7 1259 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 KLC2Q9H0B6 622 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 MARCH2Q9P0N8 246 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 STK39Q9UEW8 545 aa20.46■□□□□ 0.87
TRIM47-204ENST00000587339 XPO7Q9UIA9 1087 aaKnown RBP20.46■□□□□ 0.87
TRIM47-204ENST00000587339 GOLGA6CA6NDK9 693 aa20.45■□□□□ 0.86
TRIM47-204ENST00000587339 C5orf60A6NFR6 353 aa20.45■□□□□ 0.86
TRIM47-204ENST00000587339 FGF18O76093 207 aa20.45■□□□□ 0.86
TRIM47-204ENST00000587339 GOLGA6DP0CG33 693 aa20.45■□□□□ 0.86
TRIM47-204ENST00000587339 HTR7P34969 479 aa20.45■□□□□ 0.86
TRIM47-204ENST00000587339 ALDH1A3P47895 512 aa20.45■□□□□ 0.86
TRIM47-204ENST00000587339 PRKD1Q15139 912 aaPredicted RBP20.45■□□□□ 0.86
TRIM47-204ENST00000587339 GLIPR1L2Q4G1C9 344 aa20.45■□□□□ 0.86
TRIM47-204ENST00000587339 NPWQ8N729 165 aa20.45■□□□□ 0.86
TRIM47-204ENST00000587339 UHMK1Q8TAS1 419 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms