RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 TUBB3Q13509 450 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 C1orf146Q5VVC0 180 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 ZNF778Q96MU6 729 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 CSPG4P5Q96PW8 444 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 APOL6Q9BWW8 343 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 KATNBL1Q9H079 304 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 SPATS2LQ9NUQ6 558 aaKnown RBP17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 DDX43Q9NXZ2 648 aaKnown RBP17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 DTLQ9NZJ0 730 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 SOX13Q9UN79 622 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 AP4E1Q9UPM8 1137 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 AKT3Q9Y243 479 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 SCN4AP35499 1836 aa17.37■□□□□ 0.37
PRKCSH-205ENST00000587327 PDHXO00330 501 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 ITM2AO43736 263 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 SMIM24O75264 130 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 CHRM1P11229 460 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 MLNP12872 115 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 NIPAL4Q0D2K0 466 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 TEDDM1Q5T9Z0 273 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 N4BP2L1Q5TBK1 243 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 C16orf46Q6P387 395 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 CASC4Q6P4E1 433 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 DENND5BQ6ZUT9 1274 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 HTR3CQ8WXA8 447 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 STN1Q9H668 368 aaKnown RBP17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 GPAMQ9HCL2 828 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 VTA1Q9NP79 307 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 MORF4L1Q9UBU8 362 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 MAGEA13PA6NCF6 341 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 LYPLA1O75608 230 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 VTNP04004 478 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 FGF3P11487 239 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 SLC1A6P48664 564 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 CCNA1P78396 465 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 PDE1CQ14123 709 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 PPTC7Q8NI37 304 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 ATP2A3Q93084 1043 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 IFT43Q96FT9 208 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 MS4A4AQ96JQ5 239 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 TSC22D3Q99576 134 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 DCDC2Q9UHG0 476 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 DNAJC16Q9Y2G8 782 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 NME7Q9Y5B8 376 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 SNX9Q9Y5X1 595 aa17.36■□□□□ 0.37
PRKCSH-205ENST00000587327 A0A088AWK7 358 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 RBM47A0AV96 593 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 BTBD19C9JJ37 291 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 TPP1O14773 563 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 MAP3K13O43283 966 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 PLIN3O60664 434 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 GLRA3O75311 464 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 C6orf222P0C671 652 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 ADCYAP1R1P41586 468 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 RPL10AP62906 217 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 CRADDP78560 199 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 GSTA3Q16772 222 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 RABGAP1LQ5R372 815 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 TMCO4Q5TGY1 634 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 NCBP2-AS2Q69YL0 99 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 PACS1Q6VY07 963 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 CLEC4CQ8WTT0 213 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 TFB1MQ8WVM0 346 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 CDKL2Q92772 493 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 KCTD15Q96SI1 283 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 NDE1Q9NXR1 346 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 SLC17A6Q9P2U8 582 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 APOBEC2Q9Y235 224 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 NR2E3Q9Y5X4 410 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 A0A0A0MRY4 1105 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 GLTPD2A6NH11 291 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 AHCYL1O43865 530 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 TSPAN1O60635 241 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 DGKIO75912 1065 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 KCNA4P22459 653 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 FDFT1P37268 417 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 ERFP50548 548 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 CACNA2D1P54289 1103 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 RNF220Q5VTB9 566 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 LRRC8BQ6P9F7 803 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 SLC26A9Q7LBE3 791 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 HACE1Q8IYU2 909 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 SPDYE1Q8NFV5 336 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 EMID1Q96A84 441 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 SPATA13Q96N96 652 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 OLFM3Q96PB7 478 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 C16orf70Q9BSU1 422 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 ZNF408Q9H9D4 720 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 XPNPEP3Q9NQH7 507 aa17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-205ENST00000587327 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-205ENST00000587327 KLHL2O95198 593 aa17.34■□□□□ 0.37
PRKCSH-205ENST00000587327 VAV1P15498 845 aa17.34■□□□□ 0.37
PRKCSH-205ENST00000587327 DSG1Q02413 1049 aa17.34■□□□□ 0.37
PRKCSH-205ENST00000587327 CCNJLQ8IV13 435 aa17.34■□□□□ 0.37
PRKCSH-205ENST00000587327 CCDC185Q8N715 623 aa17.34■□□□□ 0.37
PRKCSH-205ENST00000587327 NR1H4Q96RI1 486 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-205ENST00000587327 TTC1Q99614 292 aa17.34■□□□□ 0.37
PRKCSH-205ENST00000587327 PPP1R12CQ9BZL4 782 aa17.34■□□□□ 0.37
PRKCSH-205ENST00000587327 MFHAS1Q9Y4C4 1052 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms