RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ACBD6Q9BR61 282 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 CD93Q9NPY3 652 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 ARGLU1Q9NWB6 273 aaPredicted RBP8.21□□□□□ -1.1
VMP1-204ENST00000587259 LCMT1Q9UIC8 334 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 MMP17Q9ULZ9 603 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 HYOU1Q9Y4L1 999 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 CPQQ9Y646 472 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 ANAPC1Q9H1A4 1944 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 TCRBV21S2A2A0A5A6 115 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 CTAGE15A4D2H0 777 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 CLDN5O00501 218 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 HUS1O60921 280 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 ADAM23O75077 832 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 RTN2O75298 545 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 CLSTN1O94985 981 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 ASS1P00966 412 aaKnown RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 CFIP05156 583 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 CTAGE8P0CG41 777 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 MYBL1P10243 752 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 ENGP17813 658 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 ITPKAP23677 461 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 MCM3P25205 808 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 ATICP31939 592 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 GRIK1P39086 918 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 HADHBP55084 474 aaKnown RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 RPL10AP62906 217 aaKnown RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 AMPD2Q01433 879 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 CDR2Q01850 454 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 APBA1Q02410 837 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 RING1Q06587 406 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 SMARCB1Q12824 385 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 CUL2Q13617 745 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 TCEAL1Q15170 157 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 DHCR24Q15392 516 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 NFE2Q16621 373 aaPredicted RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 TDRD10Q5VZ19 366 aaKnown RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 GJB7Q6PEY0 223 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 TRAPPC11Q7Z392 1133 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 CTAGE6Q86UF2 777 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 ARHGEF19Q8IW93 802 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 CTAGE4Q8IX94 777 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 NAT16Q8N8M0 369 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 IL17RCQ8NAC3 791 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 KDF1Q8NAX2 398 aaPredicted RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 SLC30A5Q8TAD4 765 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 EPS8L1Q8TE68 723 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 ZCCHC14Q8WYQ9 949 aaKnown RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 TRMT2BQ96GJ1 504 aaKnown RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 MYRFLQ96LU7 910 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 CAMK1GQ96NX5 476 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 SYT15Q9BQS2 421 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 SYT11Q9BT88 431 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 GTPBP2Q9BX10 602 aaKnown RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 NIF3L1Q9GZT8 377 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 LACRTQ9GZZ8 138 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 SLC6A17Q9H1V8 727 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 DPEP3Q9H4B8 488 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 SEPT11Q9NVA2 429 aaKnown RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 BCCIPQ9P287 314 aaKnown RBP eCLIP8.2□□□□□ -1.1
VMP1-204ENST00000587259 CFAP97Q9P2B7 532 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 UXTQ9UBK9 157 aaPredicted RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 NENFQ9UMX5 172 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 ARHGAP26Q9UNA1 814 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 CEP83Q9Y592 693 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 PTPRDP23468 1912 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 DMXL2Q8TDJ6 3036 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 MYOFQ9NZM1 2061 aa8.2□□□□□ -1.1
VMP1-204ENST00000587259 DSPP15924 2871 aaKnown RBP8.2□□□□□ -1.1
VMP1-204ENST00000587259 ADAMTS9Q9P2N4 1935 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 F8VP50 259 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 TAF4O00268 1085 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 FOXN3O00409 490 aaPredicted RBP8.19□□□□□ -1.1
VMP1-204ENST00000587259 GABRDO14764 452 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 NFATC1O95644 943 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 STAU1O95793 577 aaKnown RBP8.19□□□□□ -1.1
VMP1-204ENST00000587259 KRT5P13647 590 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 CEACAM1P13688 526 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 CYP11B1P15538 503 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 USP8P40818 1118 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 P2RY2P41231 377 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 PAFAH1B1P43034 410 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 SIM1P81133 766 aaPredicted RBP8.19□□□□□ -1.1
VMP1-204ENST00000587259 ZNF699Q32M78 642 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 CFAP221Q4G0U5 840 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 MDH1BQ5I0G3 518 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 CCDC181Q5TID7 509 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 FAM171BQ6P995 826 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 RHBDF2Q6PJF5 856 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 C19orf48Q6RUI8 117 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 MIB1Q86YT6 1006 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 ADGRG2Q8IZP9 1017 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 PGBD3Q8N328 593 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 CHCHD4Q8N4Q1 142 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 OLIG1Q8TAK6 271 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 SEMA4DQ92854 862 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 PCED1BQ96HM7 432 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 KREMEN1Q96MU8 473 aa8.19□□□□□ -1.1
VMP1-204ENST00000587259 MRPL45Q9BRJ2 306 aaKnown RBP8.19□□□□□ -1.1
VMP1-204ENST00000587259 IRX2Q9BZI1 471 aaPredicted RBP8.19□□□□□ -1.1
VMP1-204ENST00000587259 ISCUQ9H1K1 167 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms