RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 AGPAT1Q99943 283 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 NUP58Q9BVL2 599 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 EPC1Q9H2F5 836 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 OTOGLQ3ZCN5 2332 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 EP300Q09472 2414 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 SYNJ2BP-COX16A0A087WUM0 186 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 GOLGA6L7A0A1B0GV03 622 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 ANTXRLA6NF34 631 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 LRRC53A6NM62 1247 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 KCNU1A8MYU2 1149 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 M0QYT0 321 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 SGK1O00141 431 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 NPC1O15118 1278 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 GFRA3O60609 400 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 F9P00740 461 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 RNASE9P60153 205 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 NME3Q13232 169 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 EIF4HQ15056 248 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 CLEC16AQ2KHT3 1053 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 SLC25A52Q3SY17 297 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 C2CD6Q53TS8 623 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 MS4A13Q5J8X5 152 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 MMS22LQ6ZRQ5 1243 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 ASCL5Q7RTU5 278 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 IRF2BP2Q7Z5L9 587 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 TSTD1Q8NFU3 115 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 SLC30A5Q8TAD4 765 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 NT5C3BQ969T7 300 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 IQCDQ96DY2 449 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 PGAP3Q96FM1 320 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 PCDHB18PQ96TA0 734 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 NPY6RQ99463 290 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 TTYH3Q9C0H2 523 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 NUCKS1Q9H1E3 243 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 TSPY26PQ9H489 355 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 SEPT11Q9NVA2 429 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 AIPL1Q9NZN9 384 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 COX16Q9P0S2 106 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 EBF1Q9UH73 591 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 TMEM59LQ9UK28 342 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 PAXBP1Q9Y5B6 917 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 ZNF292O60281 2723 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 CFAP54Q96N23 3096 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 PTPRZ1P23471 2315 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 GPR179Q6PRD1 2367 aa13.79□□□□□ -0.2
SMARCA4-210ENST00000586892 EML5Q05BV3 1969 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 SPAG17Q6Q759 2223 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 GVINP1Q7Z2Y8 2422 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 FAM170AA1A519 330 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 GOLGA8SH3BPF8 625 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 TIMM44O43615 452 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 TBL1XO60907 577 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 ADAM23O75077 832 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 ALDH1A2O94788 518 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 CALB1P05937 261 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 TPM3P06753 285 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 HNRNPLP14866 589 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 NTSR1P30989 418 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 FLT3P36888 993 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 PBX1P40424 430 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 PXNP49023 591 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 SULT1E1P49888 294 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 SGSHP51688 502 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 GSCP56915 257 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 ASIC2Q16515 512 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 GEN1Q17RS7 908 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 SFMBT2Q5VUG0 894 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 EGFLAMQ63HQ2 1017 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 SDE2Q6IQ49 451 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 PPP1R2P3Q6NXS1 205 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 SND1Q7KZF4 910 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 CHSY1Q86X52 802 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 PHF13Q86YI8 300 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 CHPFQ8IZ52 775 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 SUMF1Q8NBK3 374 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 WFIKKN2Q8TEU8 576 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 UCMAQ8WVF2 138 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 PRICKLE1Q96MT3 831 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 C11orf70Q9BRQ4 267 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 POLMQ9NP87 494 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 ADAM22Q9P0K1 906 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 XPO7Q9UIA9 1087 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 HCN2Q9UL51 889 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 CLEC4EQ9ULY5 219 aa13.78□□□□□ -0.2
SMARCA4-210ENST00000586892 A0A1W2PQJ5 194 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 F5H5T6 163 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 AXIN1O15169 862 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 TACR2P21452 398 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 HLA-FP30511 346 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 HOXC13P31276 330 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 PRKCIP41743 596 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 DEUP1Q05D60 604 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 PTP4A2Q12974 167 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 BRMS1LQ5PSV4 323 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 TTC39BQ5VTQ0 682 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 OTUD1Q5VV17 481 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 RAP1GAP2Q684P5 730 aa13.77□□□□□ -0.21
SMARCA4-210ENST00000586892 TMEM92Q6UXU6 159 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms