RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 TRIM24O15164 1050 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 TULP3O75386 442 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 MYBL1P10243 752 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 CXCR3P49682 368 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 FZD5Q13467 585 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 LRRC32Q14392 662 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 PPP2R5DQ14738 602 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 SLC18A3Q16572 532 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 FAM131BQ86XD5 332 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 LGI2Q8N0V4 545 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 FAM172AQ8WUF8 416 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 PGAP3Q96FM1 320 aaPredicted RBP22.24■■□□□ 1.15
RETREG3-204ENST00000586796 SIK2Q9H0K1 926 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 ARHGEF4Q9NR80 690 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 SPTLC3Q9NUV7 552 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 STIM2Q9P246 746 aa22.24■■□□□ 1.15
RETREG3-204ENST00000586796 CUL9Q8IWT3 2517 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.23■■□□□ 1.15
RETREG3-204ENST00000586796 TBL1XO60907 577 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 PAGE1O75459 146 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 TACR2P21452 398 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 DRD1P21728 446 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 GGCXP38435 758 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 PTPN9P43378 593 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 MESP2Q0VG99 397 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 ASTE1Q2TB18 679 aaPredicted RBP22.23■■□□□ 1.15
RETREG3-204ENST00000586796 BRMS1LQ5PSV4 323 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 PIK3R6Q5UE93 754 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 GRAMD4Q6IC98 578 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 SFTPA1Q8IWL2 248 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 ETFBKMTQ8IXQ9 262 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 CFAP52Q8N1V2 620 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 MYEOVQ96EZ4 313 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 ANLNQ9NQW6 1124 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 TMPRSS4Q9NRS4 437 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 ARHGEF38Q9NXL2 777 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 PAXBP1Q9Y5B6 917 aa22.23■■□□□ 1.15
RETREG3-204ENST00000586796 CCP110O43303 1012 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 CACNG3O60359 315 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 KAT7O95251 611 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 PENKP01210 267 aaPredicted RBP22.22■■□□□ 1.15
RETREG3-204ENST00000586796 APODP05090 189 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 CDC25BP30305 580 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 EIF2DP41214 584 aaKnown RBP22.22■■□□□ 1.15
RETREG3-204ENST00000586796 DGKGP49619 791 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 ZNF143P52747 638 aaPredicted RBP22.22■■□□□ 1.15
RETREG3-204ENST00000586796 GALCP54803 685 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 SEC13P55735 322 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 OGDHQ02218 1023 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 CCINQ13939 588 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 MS4A13Q5J8X5 152 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 DGKKQ5KSL6 1271 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 CLDN23Q96B33 292 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 PRICKLE1Q96MT3 831 aaPredicted RBP22.22■■□□□ 1.15
RETREG3-204ENST00000586796 CLEC4EQ9ULY5 219 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 SNX10Q9Y5X0 201 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 SCINQ9Y6U3 715 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 MYOFQ9NZM1 2061 aa22.22■■□□□ 1.15
RETREG3-204ENST00000586796 TYW5A2RUC4 315 aaKnown RBP22.21■■□□□ 1.15
RETREG3-204ENST00000586796 TBC1D3BA6NDS4 549 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 F5H5T6 163 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 ENDOD1O94919 500 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 PSMA2P25787 234 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 HOXD9P28356 352 aaPredicted RBP22.21■■□□□ 1.15
RETREG3-204ENST00000586796 RPS24P62847 133 aaKnown RBP22.21■■□□□ 1.15
RETREG3-204ENST00000586796 SCYL2Q6P3W7 929 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 Q6ZS52 159 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 STRADAQ7RTN6 431 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 BNIPLQ7Z465 357 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 EZH1Q92800 747 aaPredicted RBP22.21■■□□□ 1.15
RETREG3-204ENST00000586796 ARHGEF26Q96DR7 871 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 PACSIN1Q9BY11 444 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 TRIM7Q9C029 511 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 MRPL47Q9HD33 250 aaKnown RBP22.21■■□□□ 1.15
RETREG3-204ENST00000586796 DLGAP2Q9P1A6 1054 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 NENFQ9UMX5 172 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 HS3ST4Q9Y661 456 aa22.21■■□□□ 1.15
RETREG3-204ENST00000586796 ANTXRLA6NF34 631 aa22.2■■□□□ 1.14
RETREG3-204ENST00000586796 TMEM191CA6NGB0 347 aa22.2■■□□□ 1.14
RETREG3-204ENST00000586796 I6L893 689 aaPredicted RBP22.2■■□□□ 1.14
RETREG3-204ENST00000586796 GFRA2O00451 464 aa22.2■■□□□ 1.14
RETREG3-204ENST00000586796 DESP17661 470 aa22.2■■□□□ 1.14
RETREG3-204ENST00000586796 GRIA2P42262 883 aa22.2■■□□□ 1.14
RETREG3-204ENST00000586796 HDAC4P56524 1084 aa22.2■■□□□ 1.14
RETREG3-204ENST00000586796 PREPLQ4J6C6 727 aaPredicted RBP22.2■■□□□ 1.14
RETREG3-204ENST00000586796 PHTF2Q8N3S3 785 aa22.2■■□□□ 1.14
RETREG3-204ENST00000586796 DTWD2Q8NBA8 298 aa22.2■■□□□ 1.14
RETREG3-204ENST00000586796 HJURPQ8NCD3 748 aaPredicted RBP22.2■■□□□ 1.14
RETREG3-204ENST00000586796 CENPIQ92674 756 aaPredicted RBP22.2■■□□□ 1.14
RETREG3-204ENST00000586796 CNPY3Q9BT09 278 aa22.2■■□□□ 1.14
RETREG3-204ENST00000586796 SPATA6Q9NWH7 488 aaPredicted RBP22.2■■□□□ 1.14
RETREG3-204ENST00000586796 VANGL2Q9ULK5 521 aa22.2■■□□□ 1.14
RETREG3-204ENST00000586796 GOLGA6L3A6NEY3 463 aa22.19■■□□□ 1.14
RETREG3-204ENST00000586796 K7EQS6 105 aa22.19■■□□□ 1.14
RETREG3-204ENST00000586796 RNF40O75150 1001 aa22.19■■□□□ 1.14
RETREG3-204ENST00000586796 CISD3P0C7P0 127 aa22.19■■□□□ 1.14
RETREG3-204ENST00000586796 RPS9P46781 194 aaKnown RBP22.19■■□□□ 1.14
RETREG3-204ENST00000586796 MTA1Q13330 715 aa22.19■■□□□ 1.14
RETREG3-204ENST00000586796 AUHQ13825 339 aaKnown RBP22.19■■□□□ 1.14
RETREG3-204ENST00000586796 C10orf76Q5T2E6 689 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms