RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 TACR2P21452 398 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 COMTP21964 271 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 GJC1P36383 396 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 SCAPQ12770 1279 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 NR1H3Q13133 447 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 EML3Q32P44 896 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 BOLA3Q53S33 107 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 FAM133BQ5BKY9 247 aaKnown RBP14.1□□□□□ -0.15
VMP1-203ENST00000586245 MS4A13Q5J8X5 152 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 ZFYVE27Q5T4F4 411 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 PIK3R6Q5UE93 754 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 TRIM68Q6AZZ1 485 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 NADSYN1Q6IA69 706 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 LRRC31Q6UY01 552 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 PSTKQ8IV42 348 aaKnown RBP14.1□□□□□ -0.15
VMP1-203ENST00000586245 FAM217AQ8IXS0 508 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 ADGRG2Q8IZP9 1017 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 GJD3Q8N144 294 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 CPA6Q8N4T0 437 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 CSGALNACT1Q8TDX6 532 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 TEKT4Q8WW24 435 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 ASIC4Q96FT7 647 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 ALS2CR12Q96Q35 445 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 PEBP4Q96S96 227 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 FAM83CQ9BQN1 747 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 SNRNP25Q9BV90 132 aaKnown RBP14.1□□□□□ -0.15
VMP1-203ENST00000586245 OSBPL2Q9H1P3 480 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 EBF3Q9H4W6 596 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 ANLNQ9NQW6 1124 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 SPHK2Q9NRA0 654 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 TMPRSS4Q9NRS4 437 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 AP4E1Q9UPM8 1137 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 HYOU1Q9Y4L1 999 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 HS3ST4Q9Y661 456 aa14.1□□□□□ -0.15
VMP1-203ENST00000586245 TRDMT1O14717 391 aaKnown RBP14.09□□□□□ -0.15
VMP1-203ENST00000586245 TSPAN3O60637 253 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 ADH1CP00326 375 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 SRFP11831 508 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 TNNT1P13805 278 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 ARSAP15289 507 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 TCF4P15884 667 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 VCPP55072 806 aaKnown RBP14.09□□□□□ -0.15
VMP1-203ENST00000586245 MLLT6P55198 1093 aaPredicted RBP14.09□□□□□ -0.15
VMP1-203ENST00000586245 PFKPQ01813 784 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 SLC25A11Q02978 314 aaKnown RBP14.09□□□□□ -0.15
VMP1-203ENST00000586245 RUNX3Q13761 415 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 RABGAP1LQ5R372 815 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 RFWD3Q6PCD5 774 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 TPGS1Q6ZTW0 290 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 CPNE8Q86YQ8 564 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 RNF135Q8IUD6 432 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 REXO1L1PQ8IX06 675 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 RHOT1Q8IXI2 618 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 LGI2Q8N0V4 545 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 CCAR2Q8N163 923 aaKnown RBP14.09□□□□□ -0.15
VMP1-203ENST00000586245 HSPH1Q92598 858 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 C1orf74Q96LT6 269 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 IRX2Q9BZI1 471 aaPredicted RBP14.09□□□□□ -0.15
VMP1-203ENST00000586245 GOLPH3Q9H4A6 298 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 DHX35Q9H5Z1 703 aaKnown RBP14.09□□□□□ -0.15
VMP1-203ENST00000586245 GPATCH2LQ9NWQ4 482 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 OR12D3Q9UGF7 316 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 AMFRQ9UKV5 643 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 SORCS3Q9UPU3 1222 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 CAPN6Q9Y6Q1 641 aa14.09□□□□□ -0.15
VMP1-203ENST00000586245 I6L893 689 aaPredicted RBP14.08□□□□□ -0.16
VMP1-203ENST00000586245 RARAP10276 462 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 ADH5P11766 374 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 IL1R2P27930 398 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 SLC6A4P31645 630 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 GGCXP38435 758 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 TAS2R40P59535 323 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 TNK2Q07912 1038 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 AUHQ13825 339 aaKnown RBP14.08□□□□□ -0.16
VMP1-203ENST00000586245 DHCR24Q15392 516 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 SMTNL2Q2TAL5 461 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 ANO4Q32M45 955 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 ITPRIPL2Q3MIP1 535 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 MPPE1Q53F39 396 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 ODF2Q5BJF6 829 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 KCNT1Q5JUK3 1230 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 LY6G5CQ5SRR4 150 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 LRRC38Q5VT99 294 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 CYP4V2Q6ZWL3 525 aaPredicted RBP14.08□□□□□ -0.16
VMP1-203ENST00000586245 PEX26Q7Z412 305 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 POLNQ7Z5Q5 900 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 LRRC57Q8N9N7 239 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 TRIM58Q8NG06 486 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 DDI1Q8WTU0 396 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 DNASE1L2Q92874 299 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 TMA16Q96EY4 203 aaKnown RBP14.08□□□□□ -0.16
VMP1-203ENST00000586245 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.16
VMP1-203ENST00000586245 EPAS1Q99814 870 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 PRMT1Q99873 361 aaKnown RBP14.08□□□□□ -0.16
VMP1-203ENST00000586245 BBS2Q9BXC9 721 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 ECT2Q9H8V3 914 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 TRPV5Q9NQA5 729 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 HPS4Q9NQG7 708 aa14.08□□□□□ -0.16
VMP1-203ENST00000586245 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.08□□□□□ -0.16
VMP1-203ENST00000586245 VANGL2Q9ULK5 521 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms