RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 ETNK1Q9HBU6 452 aa14.64□□□□□ -0.07
LIG3-205ENST00000585941 XAB2Q9HCS7 855 aaKnown RBP14.64□□□□□ -0.07
LIG3-205ENST00000585941 TMPRSS4Q9NRS4 437 aa14.64□□□□□ -0.07
LIG3-205ENST00000585941 MARCH5Q9NX47 278 aa14.64□□□□□ -0.07
LIG3-205ENST00000585941 EURLQ9NYK6 297 aa14.64□□□□□ -0.07
LIG3-205ENST00000585941 SENP1Q9P0U3 644 aa14.64□□□□□ -0.07
LIG3-205ENST00000585941 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.63□□□□□ -0.07
LIG3-205ENST00000585941 TBKBP1A7MCY6 615 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 MAP3K6O95382 1288 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 APRTP07741 180 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 GALTP07902 379 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 PSEN1P49768 467 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 ZNF33AQ06730 810 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 FAAP100Q0VG06 881 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 GPR17Q13304 367 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 MSS51Q4VC12 460 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 ANKRD20A2Q5SQ80 823 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 ANKRD20A1Q5TYW2 823 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 ANKRD20A3Q5VUR7 823 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 MSANTD2Q6P1R3 559 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 C3orf62Q6ZUJ4 267 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 B4GALNT4Q76KP1 1039 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 EXOC3L1Q86VI1 746 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 ANKMY2Q8IV38 441 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 BCAS4Q8TDM0 211 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 SERPINB11Q96P15 392 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 SELENOSQ9BQE4 189 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 GPR62Q9BZJ7 368 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 ACSS3Q9H6R3 686 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 EIF2B3Q9NR50 452 aaKnown RBP14.63□□□□□ -0.07
LIG3-205ENST00000585941 IL37Q9NZH6 218 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 TEX264Q9Y6I9 313 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 CLUHO75153 1309 aa14.63□□□□□ -0.07
LIG3-205ENST00000585941 FAM72CH0Y354 149 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 SLC2A3P11169 496 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 MLNP12872 115 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 RFC2P35250 354 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 NRLP54845 237 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 GEMIN4P57678 1058 aaKnown RBP14.62□□□□□ -0.07
LIG3-205ENST00000585941 GPX6P59796 221 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 COG7P83436 770 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 TLE2Q04725 743 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 GAD2Q05329 585 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 AP1B1Q10567 949 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 IKBKEQ14164 716 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 FAM72AQ5TYM5 149 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 TTC19Q6DKK2 380 aaPredicted RBP14.62□□□□□ -0.07
LIG3-205ENST00000585941 FAM72DQ6L9T8 149 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 CNKSR3Q6P9H4 555 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 CTU1Q7Z7A3 348 aaKnown RBP14.62□□□□□ -0.07
LIG3-205ENST00000585941 SCD5Q86SK9 330 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 FAM72BQ86X60 149 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 TAB3Q8N5C8 712 aaPredicted RBP14.62□□□□□ -0.07
LIG3-205ENST00000585941 CCNYQ8ND76 341 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 P2RY11Q96G91 374 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 SCLYQ96I15 445 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 SPATA17Q96L03 361 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 CEP295NLQ96MC4 621 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 TTPALQ9BTX7 342 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 PRDM12Q9H4Q4 367 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 ANLNQ9NQW6 1124 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 PSMC3IPQ9P2W1 217 aaPredicted RBP14.62□□□□□ -0.07
LIG3-205ENST00000585941 MFHAS1Q9Y4C4 1052 aa14.62□□□□□ -0.07
LIG3-205ENST00000585941 FAM92AA1XBS5 289 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 I6L893 689 aaPredicted RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 RNF103O00237 685 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 FGF10O15520 208 aaPredicted RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 TBC1D4O60343 1298 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 LRIG2O94898 1065 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 MYCP01106 439 aaPredicted RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 CPB1P15086 417 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 VAV1P15498 845 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 EPHB2P29323 1055 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 GATMP50440 423 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 ATN1P54259 1190 aaPredicted RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 CCL23P55773 120 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 NRG1Q02297 640 aaPredicted RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 PARP6Q2NL67 630 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 LZTR1Q8N653 840 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 HDAC11Q96DB2 347 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 CYTH2Q99418 400 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 VAT1Q99536 393 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 LGMNQ99538 433 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 OLA1Q9NTK5 396 aaKnown RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 INTS9Q9NV88 658 aaKnown RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 CLIC5Q9NZA1 410 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 RABGEF1Q9UJ41 708 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 A0A1W2PQH9 124 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 CARNS1A5YM72 827 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 GMNCA6NCL1 334 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 TRDMT1O14717 391 aaKnown RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 METTL18O95568 372 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 CHN1P15882 459 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 YWHAQP27348 245 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 STX2P32856 288 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 ELK3P41970 407 aa14.61□□□□□ -0.07
LIG3-205ENST00000585941 ALDH7A1P49419 539 aaKnown RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 RPL10AP62906 217 aaKnown RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 PPIDQ08752 370 aaKnown RBP14.61□□□□□ -0.07
LIG3-205ENST00000585941 GALNT2Q10471 571 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms