RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 CDK5RAP1Q96SZ6 601 aaKnown RBP18.49■□□□□ 0.55
RBFOX1-222ENST00000585867 LRRC1Q9BTT6 524 aa18.49■□□□□ 0.55
RBFOX1-222ENST00000585867 MAK16Q9BXY0 300 aaKnown RBP18.49■□□□□ 0.55
RBFOX1-222ENST00000585867 FRMD8P1Q9BZ68 369 aaPredicted RBP18.49■□□□□ 0.55
RBFOX1-222ENST00000585867 NACA2Q9H009 215 aa18.49■□□□□ 0.55
RBFOX1-222ENST00000585867 DDX47Q9H0S4 455 aaKnown RBP18.49■□□□□ 0.55
RBFOX1-222ENST00000585867 AP4E1Q9UPM8 1137 aa18.49■□□□□ 0.55
RBFOX1-222ENST00000585867 FAM50BQ9Y247 325 aa18.49■□□□□ 0.55
RBFOX1-222ENST00000585867 PFKLP17858 780 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 ARSEP51690 589 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 DPYSL2Q16555 572 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 ARL13BQ3SXY8 428 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 OTUD1Q5VV17 481 aaPredicted RBP18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 CMTM8Q8IZV2 173 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 TTC13Q8NBP0 860 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 FAM71BQ8TC56 605 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 NTAN1Q96AB6 310 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 ZNF670Q9BS34 389 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 HEMGNQ9BXL5 484 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 CALN1Q9BXU9 219 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 LRRC19Q9H756 370 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 PRDM16Q9HAZ2 1276 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 OLA1Q9NTK5 396 aaKnown RBP18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 DDIT4Q9NX09 232 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 GDE1Q9NZC3 331 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 FEZ2Q9UHY8 353 aaPredicted RBP18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 RASAL2Q9UJF2 1139 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 DENND4AQ7Z401 1863 aa18.48■□□□□ 0.55
RBFOX1-222ENST00000585867 OLFM2O95897 454 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 CKMP06732 381 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 MBL2P11226 248 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 IL9P15248 144 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 AVPR1AP37288 418 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 EFEMP1Q12805 493 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 NME3Q13232 169 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 CCNG2Q16589 344 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 AAK1Q2M2I8 961 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 RAB6CQ53S08 254 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 EFHC2Q5JST6 749 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 KAZNQ674X7 775 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 WDR93Q6P2C0 686 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 OTOP3Q7RTS5 596 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 GRK7Q8WTQ7 553 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 ANKRD7Q92527 254 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 TSC1Q92574 1164 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 PARD6BQ9BYG5 372 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 RAB6CQ9H0N0 254 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 SMOC2Q9H3U7 446 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 STIM2Q9P246 746 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 RCOR3Q9P2K3 495 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 PCYOX1Q9UHG3 505 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 DNMT3LQ9UJW3 386 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 RAB21Q9UL25 225 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 FZD10Q9ULW2 581 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 TCRBV7S2A1N4TA0A589 114 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 FAM187AA6NFU0 413 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 LAMP2P13473 410 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 SP100P23497 879 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 ZNF135P52742 658 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 DR1Q01658 176 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 SCAPQ12770 1279 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 DPYSL3Q14195 570 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 MSANTD2Q6P1R3 559 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 KLHDC10Q6PID8 442 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 BBS12Q6ZW61 710 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 FAM131BQ86XD5 332 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 RFX6Q8HWS3 928 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 ARID3BQ8IVW6 561 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 ZSCAN18Q8TBC5 510 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 DQX1Q8TE96 717 aaKnown RBP18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 PHF7Q9BWX1 381 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 ADAM33Q9BZ11 813 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 PCDH18Q9HCL0 1135 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 SFMBT1Q9UHJ3 866 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 NR2E1Q9Y466 385 aa18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 ZFP37Q9Y6Q3 630 aaPredicted RBP18.47■□□□□ 0.55
RBFOX1-222ENST00000585867 SYNJ2BP-COX16A0A087WUM0 186 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 RAD51CO43502 376 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 ERLIN1O75477 346 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 IGLV3-25P01717 112 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 KRT10P13645 584 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 COILP38432 576 aaPredicted RBP18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 CXCR3P49682 368 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 KCNQ1P51787 676 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 ATXN1P54253 815 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 LMNB2Q03252 620 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 BRD3Q15059 726 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 FAM78AQ5JUQ0 283 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 CCDC137Q6PK04 289 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 TAC4Q86UU9 113 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 MIB1Q86YT6 1006 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 IFT20Q8IY31 132 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 CCDC185Q8N715 623 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 SERPINB11Q96P15 392 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 DCLK3Q9C098 648 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 RAB17Q9H0T7 212 aa18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 SMG9Q9H0W8 520 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 DHX35Q9H5Z1 703 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-222ENST00000585867 PIGVQ9NUD9 493 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms