RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 GREM1O60565 184 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 IGLV3-25P01717 112 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 UQCRHP07919 91 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 PFKLP17858 780 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 HDCP19113 662 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 TFE3P19532 575 aaPredicted RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 GBP2P32456 591 aaPredicted RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 FLT3P36888 993 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 SSR1P43307 286 aaKnown RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 KPNA1P52294 538 aaPredicted RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 SLC7A9P82251 487 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 DHX34Q14147 1143 aaKnown RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 TFDP2Q14188 446 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 LONRF2Q1L5Z9 754 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 ARHGAP15Q53QZ3 475 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 BTBD8Q5XKL5 378 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 TANGO2Q6ICL3 276 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 KLHDC10Q6PID8 442 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 PARM1Q6UWI2 310 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 SYDE1Q6ZW31 735 aaPredicted RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 OTOP3Q7RTS5 596 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 BNIPLQ7Z465 357 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 SLC13A5Q86YT5 568 aaPredicted RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 ARID3BQ8IVW6 561 aaPredicted RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 SUGP1Q8IWZ8 645 aaKnown RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 ZDHHC14Q8IZN3 488 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 DEFB106AQ8N104 65 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 ZSCAN18Q8TBC5 510 aaPredicted RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 CCHCR1Q8TD31 782 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 EDAQ92838 391 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 FGF14Q92915 247 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 CAPZA3Q96KX2 299 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 ZNF670Q9BS34 389 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 KLF16Q9BXK1 252 aaPredicted RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 TRIM7Q9C029 511 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 GOLPH3Q9H4A6 298 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 SFMBT1Q9UHJ3 866 aa13.11□□□□□ -0.31
VMP1-202ENST00000585847 PACSIN2Q9UNF0 486 aaPredicted RBP13.11□□□□□ -0.31
VMP1-202ENST00000585847 TRIOO75962 3097 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 TRAV19A0A0A6YYK7 116 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 SRGAP2O75044 1071 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 KRT1P04264 644 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 SLC2A3P11169 496 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 ZFXP17010 805 aaPredicted RBP13.1□□□□□ -0.31
VMP1-202ENST00000585847 CXCR5P32302 372 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 VIPR2P41587 438 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 OGDHQ02218 1023 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 SCAPQ12770 1279 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 USP4Q13107 963 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 HTR4Q13639 388 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 TAZQ16635 292 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 CYP1B1Q16678 543 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 CCDC14Q49A88 953 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 RAB6CQ53S08 254 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 TFDP3Q5H9I0 405 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 BRMS1LQ5PSV4 323 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 C8orf74Q6P047 294 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 DRICH1Q6PGQ1 229 aaPredicted RBP13.1□□□□□ -0.31
VMP1-202ENST00000585847 EMC1Q8N766 993 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 TDRD5Q8NAT2 981 aaKnown RBP13.1□□□□□ -0.31
VMP1-202ENST00000585847 FAM71BQ8TC56 605 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 DQX1Q8TE96 717 aaKnown RBP13.1□□□□□ -0.31
VMP1-202ENST00000585847 GRK7Q8WTQ7 553 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 FAM172AQ8WUF8 416 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 KRT35Q92764 455 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 SLCO2A1Q92959 643 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 PBXIP1Q96AQ6 731 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 BTBD6Q96KE9 485 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 PKNOX2Q96KN3 472 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 PSMB7Q99436 277 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 NPY6RQ99463 290 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 PRRX2Q99811 253 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 OSBPL8Q9BZF1 889 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 RAB6CQ9H0N0 254 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 GKN1Q9NS71 199 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 DONSONQ9NYP3 566 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 RASAL2Q9UJF2 1139 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 ARHGAP26Q9UNA1 814 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 CPQQ9Y646 472 aa13.1□□□□□ -0.31
VMP1-202ENST00000585847 ZFP37Q9Y6Q3 630 aaPredicted RBP13.1□□□□□ -0.31
VMP1-202ENST00000585847 FAM187AA6NFU0 413 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 PHF2O75151 1096 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 COL4A2P08572 1712 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 PYGMP11217 842 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 RALAP11233 206 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 NCAM1P13591 858 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 TCF3P15923 654 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 MIPP30301 263 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 ATP5C1P36542 298 aaKnown RBP13.09□□□□□ -0.31
VMP1-202ENST00000585847 PTPN5P54829 565 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 ZNF77Q15935 545 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 DPYSL2Q16555 572 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 MAP9Q49MG5 647 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 C10orf120Q5SQS8 335 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 DCAF12L1Q5VU92 463 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 WDR93Q6P2C0 686 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 VITQ6UXI7 678 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 TRIM67Q6ZTA4 783 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 TAC4Q86UU9 113 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 CCDC50Q8IVM0 306 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms