RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 BNIPLQ7Z465 357 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 PSTKQ8IV42 348 aaKnown RBP17.53■□□□□ 0.4
HMG20B-215ENST00000585741 ARID3BQ8IVW6 561 aaPredicted RBP17.53■□□□□ 0.4
HMG20B-215ENST00000585741 SUGP1Q8IWZ8 645 aaKnown RBP17.53■□□□□ 0.4
HMG20B-215ENST00000585741 NPAS3Q8IXF0 933 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 ARFGAP1Q8N6T3 406 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 CCDC185Q8N715 623 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 ACSF2Q96CM8 615 aaPredicted RBP17.53■□□□□ 0.4
HMG20B-215ENST00000585741 RBM41Q96IZ5 413 aaKnown RBP17.53■□□□□ 0.4
HMG20B-215ENST00000585741 BTN2A3PQ96KV6 586 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 FCRL2Q96LA5 508 aaPredicted RBP17.53■□□□□ 0.4
HMG20B-215ENST00000585741 WDR24Q96S15 920 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 PRRX2Q99811 253 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 SNRNP25Q9BV90 132 aaKnown RBP17.53■□□□□ 0.4
HMG20B-215ENST00000585741 ADAM33Q9BZ11 813 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 SIK2Q9H0K1 926 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 RAB6CQ9H0N0 254 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 POMKQ9H5K3 350 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.53■□□□□ 0.4
HMG20B-215ENST00000585741 CALCOCO1Q9P1Z2 691 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 CFAP97Q9P2B7 532 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 FZD10Q9ULW2 581 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 ZNF510Q9Y2H8 683 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 PCDHA3Q9Y5H8 950 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 DMDP11532 3685 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 LRRD1A4D1F6 860 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 KCNU1A8MYU2 1149 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 LEFTY2O00292 366 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 KCNK3O14649 394 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 DAPK3O43293 454 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 ZNF500O60304 480 aaPredicted RBP17.52■□□□□ 0.4
HMG20B-215ENST00000585741 STC2O76061 302 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 ZRANB2O95218 330 aaKnown RBP eCLIP17.52■□□□□ 0.4
HMG20B-215ENST00000585741 RARAP10276 462 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 TCF4P15884 667 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 SP100P23497 879 aaPredicted RBP17.52■□□□□ 0.4
HMG20B-215ENST00000585741 IL1R2P27930 398 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 CORO1AP31146 461 aaKnown RBP17.52■□□□□ 0.4
HMG20B-215ENST00000585741 ARL4AP40617 200 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 CDH6P55285 790 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 PPP6R3Q5H9R7 873 aaPredicted RBP17.52■□□□□ 0.4
HMG20B-215ENST00000585741 LRRC31Q6UY01 552 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 OTOP3Q7RTS5 596 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 DENND1CQ8IV53 801 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 CELF5Q8N6W0 485 aaKnown RBP17.52■□□□□ 0.4
HMG20B-215ENST00000585741 SH3RF2Q8TEC5 729 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 SLC39A13Q96H72 371 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 HES6Q96HZ4 224 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 HAPLN3Q96S86 360 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 EPAS1Q99814 870 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 SMG9Q9H0W8 520 aaKnown RBP17.52■□□□□ 0.4
HMG20B-215ENST00000585741 GPATCH2LQ9NWQ4 482 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 ARHGEF38Q9NXL2 777 aa17.52■□□□□ 0.4
HMG20B-215ENST00000585741 ZFP37Q9Y6Q3 630 aaPredicted RBP17.52■□□□□ 0.4
HMG20B-215ENST00000585741 C2CD4DB7Z1M9 353 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 CREB3O43889 395 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 PAGE1O75459 146 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 ATP1A1P05023 1023 aaKnown RBP17.51■□□□□ 0.39
HMG20B-215ENST00000585741 PDK2Q15119 407 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 CHSY1Q86X52 802 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 KATNAL2Q8IYT4 538 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 RCOR2Q8IZ40 523 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 KIF18AQ8NI77 898 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 KRT35Q92764 455 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 SMARCD2Q92925 531 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 USP13Q92995 863 aaPredicted RBP17.51■□□□□ 0.39
HMG20B-215ENST00000585741 CD101Q93033 1021 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 E2F7Q96AV8 911 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 ZSWIM3Q96MP5 696 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 PEBP4Q96S96 227 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 PSMB7Q99436 277 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 CALN1Q9BXU9 219 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 MAK16Q9BXY0 300 aaKnown RBP17.51■□□□□ 0.39
HMG20B-215ENST00000585741 KLHL11Q9NVR0 708 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 STIM2Q9P246 746 aa17.51■□□□□ 0.39
HMG20B-215ENST00000585741 TYW5A2RUC4 315 aaKnown RBP17.5■□□□□ 0.39
HMG20B-215ENST00000585741 H3BRJ5 948 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 NRG2O14511 850 aaPredicted RBP17.5■□□□□ 0.39
HMG20B-215ENST00000585741 ACSL4O60488 711 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 LATS1O95835 1130 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 IGLV3-27P01718 113 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 TCP1P17987 556 aaKnown RBP17.5■□□□□ 0.39
HMG20B-215ENST00000585741 WEE1P30291 646 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 ZNF135P52742 658 aaPredicted RBP17.5■□□□□ 0.39
HMG20B-215ENST00000585741 SCAPQ12770 1279 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 EIF4EBP2Q13542 120 aaPredicted RBP17.5■□□□□ 0.39
HMG20B-215ENST00000585741 ATP13A4Q4VNC1 1196 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 EXD1Q8NHP7 514 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.5■□□□□ 0.39
HMG20B-215ENST00000585741 RNF25Q96BH1 459 aaPredicted RBP17.5■□□□□ 0.39
HMG20B-215ENST00000585741 PBKQ96KB5 322 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 TLR10Q9BXR5 811 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 ZFP14Q9HCL3 533 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 FAM86C1Q9NVL1 165 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 THG1LQ9NWX6 298 aaKnown RBP17.5■□□□□ 0.39
HMG20B-215ENST00000585741 OR12D3Q9UGF7 316 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 ZFHX2Q9C0A1 2572 aaPredicted RBP17.5■□□□□ 0.39
HMG20B-215ENST00000585741 CFAP54Q96N23 3096 aa17.5■□□□□ 0.39
HMG20B-215ENST00000585741 MYO10Q9HD67 2058 aa17.49■□□□□ 0.39
HMG20B-215ENST00000585741 E2F8A0AVK6 867 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms