RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ATP8B2P98198 1209 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 MAPK7Q13164 816 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ADAM15Q13444 863 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ADRM1Q16186 407 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CCNG2Q16589 344 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SRSF7Q16629 238 aaKnown RBP eCLIP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PREPLQ4J6C6 727 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 DGKKQ5KSL6 1271 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 HYIQ5T013 277 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 BEND3Q5T5X7 828 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 KANK2Q63ZY3 851 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SYNE3Q6ZMZ3 975 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ATP11CQ8NB49 1132 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 FBXO18Q8NFZ0 1043 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CEP70Q8NHQ1 597 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 BARD1Q99728 777 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 MS4A7Q9GZW8 240 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 OSBPL5Q9H0X9 879 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SAYSD1Q9NPB0 183 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 HEYLQ9NQ87 328 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF277Q9NRM2 450 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 HAUS2Q9NVX0 235 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 POLG2Q9UHN1 485 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CTNNA3Q9UI47 895 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 HERC5Q9UII4 1024 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ZBTB1Q9Y2K1 713 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TELO2Q9Y4R8 837 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PCDHB1Q9Y5F3 818 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 COL4A6Q14031 1691 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 WDR19Q8NEZ3 1342 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PHIPQ8WWQ0 1821 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 LRRC14BA6NHZ5 514 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 MYMKA6NI61 221 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 hCG_1984214I3L0E3 225 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 M0R3H8 397 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 WNT10BO00744 389 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ESRRBO95718 433 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CD1AP06126 327 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 MYF5P13349 255 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TPH1P17752 444 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 FDXRP22570 491 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 RBM5P52756 815 aaKnown RBP eCLIP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ARL4CP56559 192 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SNX16P57768 344 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 GOLGA8DPQ0D2H9 430 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 C3orf38Q5JPI3 329 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF569Q5MCW4 686 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CATSPEREQ5SY80 951 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 DENND2CQ68D51 928 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 FAM180BQ6P0A1 224 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 MZT2AQ6P582 158 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PDXDC1Q6P996 788 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 GDF7Q7Z4P5 450 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 FOXP4Q8IVH2 680 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF713Q8N859 430 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 STON2Q8WXE9 905 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CALML4Q96GE6 196 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 KRTAP17-1Q9BYP8 105 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PRSS50Q9UI38 385 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TUBD1Q9UJT1 453 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 LIMCH1Q9UPQ0 1083 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ADGRA2Q96PE1 1338 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 GOLGA6L3A6NEY3 463 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ISM1B1AKI9 464 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SMIM22K7EJ46 135 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 RAB27BO00194 218 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TRIM38O00635 465 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 COQ9O75208 318 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 USP1O94782 785 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TMEM63AO94886 807 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 BMP15O95972 392 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 ANXA2P07355 339 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 GPD1P21695 349 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SCP2P22307 547 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PHKA1P46020 1223 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 LMAN1P49257 510 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 STAT5BP51692 787 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 RARSP54136 660 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CLRN1P58418 232 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 CDC42EP1Q00587 391 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SLC29A2Q14542 456 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 BMT2Q1RMZ1 405 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 FLYWCH1Q4VC44 716 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TLDC1Q6P9B6 456 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 KIAA0319LQ8IZA0 1049 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TAGAPQ8N103 731 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 GALNT15Q8N3T1 639 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 NME8Q8N427 588 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 SSH3Q8TE77 659 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 IPO4Q8TEX9 1081 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 DCPSQ96C86 337 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 HVCN1Q96D96 273 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 NT5C1BQ96P26 610 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 PNKPQ96T60 521 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 TREX2Q9BQ50 279 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 NACAP1Q9BZK3 213 aa2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 FTOQ9C0B1 505 aaKnown RBP eCLIP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 RNF41Q9H4P4 317 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-211ENST00000584897 RSAD1Q9HA92 442 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms