RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CCDC89Q8N998 374 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 CCHCR1Q8TD31 782 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 IFT81Q8WYA0 676 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 CAVIN3Q969G5 261 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 ZNF512Q96ME7 567 aaPredicted RBP14.46□□□□□ -0.09
UBBP4-202ENST00000584755 TGS1Q96RS0 853 aaKnown RBP14.46□□□□□ -0.09
UBBP4-202ENST00000584755 DPH5Q9H2P9 285 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 PCDH9Q9HC56 1237 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 ZDHHC18Q9NUE0 388 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 TRPM5Q9NZQ8 1165 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 WHRNQ9P202 907 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 BCLAF3A2AJT9 711 aaKnown RBP14.45□□□□□ -0.1
UBBP4-202ENST00000584755 GRM6O15303 877 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 TP73O15350 636 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 SEC31AO94979 1220 aaKnown RBP14.45□□□□□ -0.1
UBBP4-202ENST00000584755 GLUD1P00367 558 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 KRT14P02533 472 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 F11P03951 625 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 ERCC2P18074 760 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 STIP1P31948 543 aaKnown RBP14.45□□□□□ -0.1
UBBP4-202ENST00000584755 ATP5C1P36542 298 aaKnown RBP14.45□□□□□ -0.1
UBBP4-202ENST00000584755 CLCN4P51793 760 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 MLLT6P55198 1093 aaPredicted RBP14.45□□□□□ -0.1
UBBP4-202ENST00000584755 KCTD19Q17RG1 926 aaPredicted RBP14.45□□□□□ -0.1
UBBP4-202ENST00000584755 HECTD3Q5T447 861 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 ACBD5Q5T8D3 534 aaPredicted RBP14.45□□□□□ -0.1
UBBP4-202ENST00000584755 PDE12Q6L8Q7 609 aaKnown RBP14.45□□□□□ -0.1
UBBP4-202ENST00000584755 C1orf228Q6PIY5 440 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 ZDHHC24Q6UX98 284 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 BZW1Q7L1Q6 419 aaKnown RBP14.45□□□□□ -0.1
UBBP4-202ENST00000584755 KREMEN2Q8NCW0 462 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 RTP4Q96DX8 246 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 TMEM121Q9BTD3 319 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 LRRC3Q9BY71 257 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 NEUROG2Q9H2A3 272 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 IL21Q9HBE4 155 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 USP29Q9HBJ7 922 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 DTLQ9NZJ0 730 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 DNMT3LQ9UJW3 386 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 SNX24Q9Y343 169 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 MFHAS1Q9Y4C4 1052 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 HEY1Q9Y5J3 304 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 RAD54BQ9Y620 910 aa14.45□□□□□ -0.1
UBBP4-202ENST00000584755 ANAPC1Q9H1A4 1944 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 MTCL1Q9Y4B5 1905 aaKnown RBP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 CFAP69A5D8W1 941 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 CCDC85CA6NKD9 419 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 ATP8B1O43520 1251 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 MFSD11O43934 449 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 OAS1P00973 400 aaKnown RBP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 APOEP02649 317 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 C8AP07357 584 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 SPATA31D3P0C874 917 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 ITIH2P19823 946 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 CA8P35219 290 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 TAF12Q16514 161 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 SPATA31D4Q6ZUB0 917 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 GSTA5Q7RTV2 222 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 ZNF683Q8IZ20 524 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 GLIS1Q8NBF1 620 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 ART4Q93070 314 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 SNF8Q96H20 258 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 BTN2A3PQ96KV6 586 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 GDF15Q99988 308 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 TRIM31Q9BZY9 425 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 ZNF334Q9HCZ1 680 aaPredicted RBP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 ASIC3Q9UHC3 531 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 YBX2Q9Y2T7 364 aaKnown RBP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 SNX10Q9Y5X0 201 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 HS3ST4Q9Y661 456 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 LAMA2P24043 3122 aaKnown RBP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 OBSL1O75147 1896 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 SLC12A8A0AV02 714 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 HACD1B0YJ81 288 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 H3BNC9 293 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 SGK1O00141 431 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 COCHO43405 550 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 FAM153BP0C7A2 387 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 IRS1P35568 1242 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 GDF10P55107 478 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 HLTFQ14527 1009 aaKnown RBP eCLIP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 FAM153CQ494X1 144 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 PABPC1LQ4VXU2 614 aaKnown RBP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 SLC45A4Q5BKX6 768 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 PIK3R6Q5UE93 754 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 NUGGCQ68CJ6 796 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 DARS2Q6PI48 645 aaKnown RBP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 ZC3H18Q86VM9 953 aaKnown RBP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 MIB1Q86YT6 1006 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 TMC8Q8IU68 726 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 UNC45BQ8IWX7 931 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 ATP6V0D2Q8N8Y2 350 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 QKIQ96PU8 341 aaKnown RBP eCLIP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 FUT8Q9BYC5 575 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 FAM153AQ9UHL3 310 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 SLC12A6Q9UHW9 1150 aa14.44□□□□□ -0.1
UBBP4-202ENST00000584755 XPO7Q9UIA9 1087 aaKnown RBP14.44□□□□□ -0.1
UBBP4-202ENST00000584755 CHD9Q3L8U1 2897 aa14.43□□□□□ -0.1
UBBP4-202ENST00000584755 IGLV3-10A0A075B6K4 115 aa14.43□□□□□ -0.1
UBBP4-202ENST00000584755 WASH4PA8MWX3 477 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms