RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TTC23Q5W5X9 447 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 NEK10Q6ZWH5 1172 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 TTC30AQ86WT1 665 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 HACD1B0YJ81 288 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 UBE2Q2LH0YL09 131 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 ABHD2P08910 425 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 GSTM1P09488 218 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 ITGADQ13349 1161 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 DGKKQ5KSL6 1271 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 C11orf88Q6PI97 169 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 KLHL17Q6TDP4 642 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 PALB2Q86YC2 1186 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 TAAR1Q96RJ0 339 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 KIAA1683Q9H0B3 1180 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 LIMD1Q9UGP4 676 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 UNC13BO14795 1591 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 TAF4O00268 1085 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 HMGB3O15347 200 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 CBFA2T3O75081 653 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 ABCB1P08183 1280 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 SLC2A4P14672 509 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 DRG2P55039 364 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 MRPS22P82650 360 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 XIAPP98170 497 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 ZDHHC17Q8IUH5 632 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 FAM126BQ8IXS8 530 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 C4orf19Q8IY42 314 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 KATNAL2Q8IYT4 538 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 RTL3Q8N8U3 475 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 APOL2Q9BQE5 337 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 ACTR8Q9H981 624 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 GPRC5CQ9NQ84 441 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 ARHGEF3Q9NR81 526 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 F5H5T6 163 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 CYP1A1P04798 512 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 NUDT17P0C025 328 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 DRD4P21917 467 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 AUHQ13825 339 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 POLD3Q15054 466 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 NFIL3Q16649 462 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 ZNF772Q68DY9 489 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 ZNF57Q68EA5 555 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 DHDDSQ86SQ9 333 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 ITFG1Q8TB96 612 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 PIWIL2Q8TC59 973 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 WDR41Q9HAD4 459 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 ZNF70Q9UC06 446 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 RSL24D1Q9UHA3 163 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 ANAPC2Q9UJX6 822 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 DYNC1LI2O43237 492 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 CENPAP49450 140 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 CSE1LP55060 971 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 ANKS6Q68DC2 871 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 CYP2R1Q6VVX0 501 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 FAM131BQ86XD5 332 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 FBXW8Q8N3Y1 598 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 EMC1Q8N766 993 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 PRDM16Q9HAZ2 1276 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 PCYOX1Q9UHG3 505 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 SPACA6W5XKT8 324 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 SF3B1O75533 1304 aaKnown RBP eCLIP13.34□□□□□ -0.274e-6■■■■■ 104.6
RNF43-208ENST00000584437 PPP2R1BP30154 601 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 RPL14P50914 215 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 BST2Q10589 180 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 SCARA3Q6AZY7 606 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 CCDC80Q76M96 950 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 SLC44A2Q8IWA5 706 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 FBXO39Q8N4B4 442 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 B3GALNT2Q8NCR0 500 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 BHLHE22Q8NFJ8 381 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 FAM81AQ8TBF8 368 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 HTR3CQ8WXA8 447 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 SLC35C1Q96A29 364 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 ADPRHL2Q9NX46 363 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 VAV3Q9UKW4 847 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 DYRK1BQ9Y463 629 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 IPPQ9Y573 584 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 GNG14A0A1W2PPG7 69 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 CAPN1P07384 714 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 EPB42P16452 691 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 RPA3P35244 121 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 TCF7P36402 384 aaPredicted RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 PRKCIP41743 596 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 PDK4Q16654 411 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 NECAB2Q7Z6G3 386 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 OR56A4Q8NGH8 313 aa13.34□□□□□ -0.27
RNF43-208ENST00000584437 STN1Q9H668 368 aaKnown RBP13.34□□□□□ -0.27
RNF43-208ENST00000584437 WDR27A2RRH5 827 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 BTNL10A8MVZ5 291 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 PTGES3LE9PB15 166 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
RNF43-208ENST00000584437 IL6P05231 212 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 ST3GAL1Q11201 340 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 BROXQ5VW32 411 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 AAGABQ6PD74 315 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 TMC7Q7Z402 723 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 ZNF605Q86T29 641 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 ADHFE1Q8IWW8 467 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 SYTL1Q8IYJ3 562 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms