RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 APOBEC3GQ9HC16 384 aaKnown RBP21.45■■□□□ 1.02
SRSF1-206ENST00000583741 THAP10Q9P2Z0 257 aaPredicted RBP21.45■■□□□ 1.02
SRSF1-206ENST00000583741 A0A1B0GTW7 788 aa21.44■■□□□ 1.02
SRSF1-206ENST00000583741 NCAM1P13591 858 aa21.44■■□□□ 1.02
SRSF1-206ENST00000583741 CCDC186Q7Z3E2 898 aa21.44■■□□□ 1.02
SRSF1-206ENST00000583741 TRIM59Q8IWR1 403 aa21.44■■□□□ 1.02
SRSF1-206ENST00000583741 IL21RQ9HBE5 538 aa21.44■■□□□ 1.02
SRSF1-206ENST00000583741 ITM2CQ9NQX7 267 aa21.44■■□□□ 1.02
SRSF1-206ENST00000583741 NUMA1Q14980 2115 aa21.44■■□□□ 1.02
SRSF1-206ENST00000583741 PES1O00541 588 aaKnown RBP21.43■■□□□ 1.02
SRSF1-206ENST00000583741 MAPK13O15264 365 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 TPMTP51580 245 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 SLCO6A1Q86UG4 719 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 CACUL1Q86Y37 369 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 NT5C1AQ9BXI3 368 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 ZDHHC5Q9C0B5 715 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 MIR1-1HGQ9H1L0 117 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 PCOLCE2Q9UKZ9 415 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 CLEC4EQ9ULY5 219 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 GPSM3Q9Y4H4 160 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 USP3Q9Y6I4 520 aa21.43■■□□□ 1.02
SRSF1-206ENST00000583741 LGALS16A8MUM7 142 aa21.42■■□□□ 1.02
SRSF1-206ENST00000583741 HMBSP08397 361 aa21.42■■□□□ 1.02
SRSF1-206ENST00000583741 CD58P19256 250 aa21.42■■□□□ 1.02
SRSF1-206ENST00000583741 BNC1Q01954 994 aa21.42■■□□□ 1.02
SRSF1-206ENST00000583741 NR1I3Q14994 352 aa21.42■■□□□ 1.02
SRSF1-206ENST00000583741 DCAF12L1Q5VU92 463 aa21.42■■□□□ 1.02
SRSF1-206ENST00000583741 CCNI2Q6ZMN8 369 aaPredicted RBP21.42■■□□□ 1.02
SRSF1-206ENST00000583741 TMPRSS6Q8IU80 811 aa21.42■■□□□ 1.02
SRSF1-206ENST00000583741 ZNF276Q8N554 614 aa21.42■■□□□ 1.02
SRSF1-206ENST00000583741 CADM4Q8NFZ8 388 aa21.42■■□□□ 1.02
SRSF1-206ENST00000583741 PIWIL1Q96J94 861 aaKnown RBP21.42■■□□□ 1.02
SRSF1-206ENST00000583741 RTN4Q9NQC3 1192 aaKnown RBP21.42■■□□□ 1.02
SRSF1-206ENST00000583741 RASAL2Q9UJF2 1139 aa21.42■■□□□ 1.02
SRSF1-206ENST00000583741 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.42■■□□□ 1.02
SRSF1-206ENST00000583741 CILPO75339 1184 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 CORO1AP31146 461 aaKnown RBP21.41■■□□□ 1.02
SRSF1-206ENST00000583741 PSEN1P49768 467 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 COPAP53621 1224 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 ZNF234Q14588 700 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 VWA3BQ502W6 1294 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 MIIPQ5JXC2 388 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 C19orf48Q6RUI8 117 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 INTS8Q75QN2 995 aaKnown RBP21.41■■□□□ 1.02
SRSF1-206ENST00000583741 GLRX5Q86SX6 157 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 TADA2BQ86TJ2 420 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 RBBP8NLQ8NC74 664 aaPredicted RBP21.41■■□□□ 1.02
SRSF1-206ENST00000583741 TAS1R2Q8TE23 839 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 SIPA1Q96FS4 1042 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 CLIC5Q9NZA1 410 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 FNDC3AQ9Y2H6 1198 aaKnown RBP21.41■■□□□ 1.02
SRSF1-206ENST00000583741 CABIN1Q9Y6J0 2220 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 TMEM131Q92545 1883 aa21.41■■□□□ 1.02
SRSF1-206ENST00000583741 GCN1Q92616 2671 aaKnown RBP21.4■■□□□ 1.02
SRSF1-206ENST00000583741 MUC22E2RYF6 1773 aaPredicted RBP21.4■■□□□ 1.02
SRSF1-206ENST00000583741 NPC1O15118 1278 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 TRIM49P0CI25 452 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 TRIM49CP0CI26 452 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 KRT13P13646 458 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 TRIM21P19474 475 aaKnown RBP21.4■■□□□ 1.02
SRSF1-206ENST00000583741 PRKCHP24723 683 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 CDC25BP30305 580 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 ZNF132P52740 706 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 CCDC173Q0VFZ6 552 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 EFEMP1Q12805 493 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 DCAF17Q5H9S7 520 aaPredicted RBP21.4■■□□□ 1.02
SRSF1-206ENST00000583741 PPP1R26Q5T8A7 1209 aaPredicted RBP21.4■■□□□ 1.02
SRSF1-206ENST00000583741 ANKS1BQ7Z6G8 1248 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 SORCS1Q8WY21 1168 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 DUSP16Q9BY84 665 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 NDST4Q9H3R1 872 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 GAREM1Q9H706 876 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 CYP3A43Q9HB55 503 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 AGO1Q9UL18 857 aaKnown RBP21.4■■□□□ 1.02
SRSF1-206ENST00000583741 ZNF510Q9Y2H8 683 aa21.4■■□□□ 1.02
SRSF1-206ENST00000583741 METTL12A8MUP2 240 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 BCAT2O15382 392 aaPredicted RBP21.39■■□□□ 1.02
SRSF1-206ENST00000583741 TEX33O43247 280 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 IGLV3-19P01714 112 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 RALAP11233 206 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 CHKAP35790 457 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 GCLMP48507 274 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 VAMP7P51809 220 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 UBXN1Q04323 297 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 PPP3CAQ08209 521 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 TCERG1LQ5VWI1 586 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 TMEM215Q68D42 235 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 DENND1CQ8IV53 801 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 C1orf216Q8TAB5 229 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 SETD7Q8WTS6 366 aaKnown RBP21.39■■□□□ 1.02
SRSF1-206ENST00000583741 PRCCQ92733 491 aaPredicted RBP21.39■■□□□ 1.02
SRSF1-206ENST00000583741 PDLIM2Q96JY6 352 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 IMPG2Q9BZV3 1241 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 NIF3L1Q9GZT8 377 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 ELOVL2Q9NXB9 296 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 EIF2B4Q9UI10 523 aaKnown RBP21.39■■□□□ 1.02
SRSF1-206ENST00000583741 APOBEC2Q9Y235 224 aaKnown RBP21.39■■□□□ 1.02
SRSF1-206ENST00000583741 SLCO1B1Q9Y6L6 691 aa21.39■■□□□ 1.02
SRSF1-206ENST00000583741 BPTFQ12830 3046 aa21.39■■□□□ 1.01
SRSF1-206ENST00000583741 SYNCRIPO60506 623 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms