RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 AADACL2Q6P093 401 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 FBXO38Q6PIJ6 1188 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 SPOCD1Q6ZMY3 1216 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 PRR23BQ6ZRT6 265 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 ANKS3Q6ZW76 656 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 CYP4V2Q6ZWL3 525 aaPredicted RBP12.42□□□□□ -0.42
GGA3-217ENST00000583667 MTERF4Q7Z6M4 381 aaKnown RBP12.42□□□□□ -0.42
GGA3-217ENST00000583667 DDX53Q86TM3 631 aaKnown RBP12.42□□□□□ -0.42
GGA3-217ENST00000583667 TMEM173Q86WV6 379 aaPredicted RBP12.42□□□□□ -0.42
GGA3-217ENST00000583667 SPATA2LQ8IUW3 424 aaPredicted RBP12.42□□□□□ -0.42
GGA3-217ENST00000583667 IFT20Q8IY31 132 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 SIX6OS1Q8N1H7 587 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 HASPINQ8TF76 798 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 KCNK16Q96T55 309 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 NPY6RQ99463 290 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 RHOXF2Q9BQY4 288 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 AP1M1Q9BXS5 423 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 RHOBTB2Q9BYZ6 727 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 LTB4R2Q9NPC1 389 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 CHST7Q9NS84 486 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 TMEM30AQ9NV96 361 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 COMMD8Q9NX08 183 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 IL37Q9NZH6 218 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 STK39Q9UEW8 545 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 DMGDHQ9UI17 866 aaKnown RBP12.42□□□□□ -0.42
GGA3-217ENST00000583667 WASF3Q9UPY6 502 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 MIA3Q5JRA6 1907 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 AKAP13Q12802 2813 aa12.42□□□□□ -0.42
GGA3-217ENST00000583667 ERLIN1O75477 346 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 CNPP09543 421 aaKnown RBP12.41□□□□□ -0.42
GGA3-217ENST00000583667 TCF4P15884 667 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 BDNFP23560 247 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 KDELR1P24390 212 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 RPS9P46781 194 aaKnown RBP12.41□□□□□ -0.42
GGA3-217ENST00000583667 CACNA2D1P54289 1103 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 NRLP54845 237 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 AIF1P55008 147 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 HDAC4P56524 1084 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 MTAPQ13126 283 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 FZD5Q13467 585 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 PDK2Q15119 407 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 ATP13A4Q4VNC1 1196 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 TXNRD3NBQ6F5E7 133 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 SLC8B1Q6J4K2 584 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 MFSD7Q6UXD7 560 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 SYDE1Q6ZW31 735 aaPredicted RBP12.41□□□□□ -0.42
GGA3-217ENST00000583667 BHLHA9Q7RTU4 235 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 HDAC7Q8WUI4 952 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 PIK3R5Q8WYR1 880 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 RAPGEF5Q92565 580 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 IGSF21Q96ID5 467 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 TMEM209Q96SK2 561 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 TTPALQ9BTX7 342 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 ULBP1Q9BZM6 244 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 POPDC2Q9HBU9 364 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.41□□□□□ -0.42
GGA3-217ENST00000583667 HSFX1Q9UBD0 423 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 DRG1Q9Y295 367 aaKnown RBP12.41□□□□□ -0.42
GGA3-217ENST00000583667 PCDHB5Q9Y5E4 795 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 LOC400499M0QZD8 3231 aa12.41□□□□□ -0.42
GGA3-217ENST00000583667 hCG_1818297A0A087WSY0 165 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 TCRBV7S2A1N4TA0A589 114 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 FAM92AA1XBS5 289 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 PIK3R2O00459 728 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 RAD51CO43502 376 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 PRPSAP2O60256 369 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 KRT1P04264 644 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 FYNP06241 537 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 RALAP11233 206 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 SPINK2P20155 84 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 COILP38432 576 aaPredicted RBP12.4□□□□□ -0.42
GGA3-217ENST00000583667 PTGIRP43119 386 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 SSR1P43307 286 aaKnown RBP12.4□□□□□ -0.42
GGA3-217ENST00000583667 VSNL1P62760 191 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 CUL1Q13616 776 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 USP41Q3LFD5 358 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 CTXN3Q4LDR2 81 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 RSPO2Q6UXX9 243 aaPredicted RBP12.4□□□□□ -0.42
GGA3-217ENST00000583667 BBS12Q6ZW61 710 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 MAP7D3Q8IWC1 876 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 DEFB106AQ8N104 65 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 TTC13Q8NBP0 860 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 SPPL2BQ8TCT7 592 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 CLEC4CQ8WTT0 213 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 FAM172AQ8WUF8 416 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 BCL7CQ8WUZ0 217 aaPredicted RBP12.4□□□□□ -0.42
GGA3-217ENST00000583667 GATA6Q92908 595 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 MAGOHBQ96A72 148 aaKnown RBP12.4□□□□□ -0.42
GGA3-217ENST00000583667 CFAP57Q96MR6 1250 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 NELL2Q99435 816 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 HERPUD2Q9BSE4 406 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 EMILIN2Q9BXX0 1053 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 DDX47Q9H0S4 455 aaKnown RBP12.4□□□□□ -0.42
GGA3-217ENST00000583667 ARFGAP3Q9NP61 516 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 RXFP3Q9NSD7 469 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 MTRRQ9UBK8 725 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 STAP1Q9ULZ2 295 aa12.4□□□□□ -0.42
GGA3-217ENST00000583667 IGSF10Q6WRI0 2623 aa12.4□□□□□ -0.43
GGA3-217ENST00000583667 UNC79Q9P2D8 2635 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms