RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 DNAJC3Q13217 504 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 E2F4Q16254 413 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-215ENST00000583328 ZACNQ401N2 412 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 MPPE1Q53F39 396 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 KIAA0895LQ68EN5 471 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 CNNM4Q6P4Q7 775 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-215ENST00000583328 CHST9Q7L1S5 443 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 ARHGAP18Q8N392 663 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 IQUBQ8NA54 791 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 LINC00301Q8NCQ3 95 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 GOLGA5Q8TBA6 731 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 ELF4Q99607 663 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-215ENST00000583328 ARID3AQ99856 593 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 DUSP16Q9BY84 665 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 NRSN2Q9GZP1 204 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 PRSS16Q9NQE7 514 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 CHMP5Q9NZZ3 219 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 SUN2Q9UH99 717 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 USP3Q9Y6I4 520 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 NUMA1Q14980 2115 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 TEX51A0A1B0GUA7 166 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 ASS1P00966 412 aaKnown RBP12.85□□□□□ -0.35
TOP3A-215ENST00000583328 HLA-FP30511 346 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 PIK3CAP42336 1068 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 ASPAP45381 313 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 DLG4P78352 724 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 KRT85P78386 507 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 CFHR1Q03591 330 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 RTP5Q14D33 572 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 HES3Q5TGS1 186 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 ZNF776Q68DI1 518 aaPredicted RBP12.85□□□□□ -0.35
TOP3A-215ENST00000583328 SV2AQ7L0J3 742 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 EID2Q8N6I1 236 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 GOLGA1Q92805 767 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 FGF11Q92914 225 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
TOP3A-215ENST00000583328 SLC6A18Q96N87 628 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 BLZF1Q9H2G9 400 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 ABCB8Q9NUT2 735 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 SHROOM3Q8TF72 1996 aa12.85□□□□□ -0.35
TOP3A-215ENST00000583328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.84□□□□□ -0.35
TOP3A-215ENST00000583328 A0A1W2PPC4 97 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 CAPN8A6NHC0 703 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 J3QKU1 62 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 SPTLC2O15270 562 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 PPP6R2O75170 966 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 HLA-DRAP01903 254 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 IGHV4-34P06331 123 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 ATP5BP06576 529 aaKnown RBP12.84□□□□□ -0.35
TOP3A-215ENST00000583328 C7P10643 843 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 PABPC1P11940 636 aaKnown RBP12.84□□□□□ -0.35
TOP3A-215ENST00000583328 CD58P19256 250 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 HOXD9P28356 352 aaPredicted RBP12.84□□□□□ -0.35
TOP3A-215ENST00000583328 CASP1P29466 404 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 HARS2P49590 506 aaKnown RBP12.84□□□□□ -0.35
TOP3A-215ENST00000583328 EHHADHQ08426 723 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 PDE4CQ08493 712 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 INCA1Q0VD86 236 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 CCDC173Q0VFZ6 552 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 PPP1R26Q5T8A7 1209 aaPredicted RBP12.84□□□□□ -0.35
TOP3A-215ENST00000583328 MBLAC2Q68D91 279 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 FAM217AQ8IXS0 508 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 SNIP1Q8TAD8 396 aaKnown RBP12.84□□□□□ -0.35
TOP3A-215ENST00000583328 PLD4Q96BZ4 506 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 IMPG2Q9BZV3 1241 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 CYP3A43Q9HB55 503 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 ASH1LQ9NR48 2969 aaKnown RBP12.84□□□□□ -0.35
TOP3A-215ENST00000583328 AASDHPPTQ9NRN7 309 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 FBXL12Q9NXK8 326 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 GGA2Q9UJY4 613 aa12.84□□□□□ -0.35
TOP3A-215ENST00000583328 YKT6O15498 198 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 WNT1P04628 370 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 DLDP09622 509 aaKnown RBP12.83□□□□□ -0.36
TOP3A-215ENST00000583328 POLR2EP19388 210 aaKnown RBP12.83□□□□□ -0.36
TOP3A-215ENST00000583328 ACTN2P35609 894 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 ACADVLP49748 655 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 GALCP54803 685 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 YWHAGP61981 247 aaKnown RBP eCLIP12.83□□□□□ -0.36
TOP3A-215ENST00000583328 CXADRP78310 365 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 SFSWAPQ12872 951 aaKnown RBP12.83□□□□□ -0.36
TOP3A-215ENST00000583328 SHBQ15464 509 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 TRIP4Q15650 581 aaPredicted RBP12.83□□□□□ -0.36
TOP3A-215ENST00000583328 TAF1BQ53T94 588 aaPredicted RBP12.83□□□□□ -0.36
TOP3A-215ENST00000583328 FBXL19Q6PCT2 694 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 USP30Q70CQ3 517 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 ADIPOR2Q86V24 386 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 AHI1Q8N157 1196 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 TMC2Q8TDI7 906 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 SAP25Q8TEE9 199 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 HEXIM2Q96MH2 286 aaKnown RBP12.83□□□□□ -0.36
TOP3A-215ENST00000583328 PABPC3Q9H361 631 aaKnown RBP12.83□□□□□ -0.36
TOP3A-215ENST00000583328 GDF3Q9NR23 364 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 DMAC2Q9NW81 257 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 RCOR1Q9UKL0 485 aa12.83□□□□□ -0.36
TOP3A-215ENST00000583328 BPTFQ12830 3046 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms