RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 TBXAS1P24557 533 aaPredicted RBP10.81□□□□□ -0.68
SS18-221ENST00000582448 HOXA9P31269 272 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 ELF1P32519 619 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 NAP1L1P55209 391 aaKnown RBP10.81□□□□□ -0.68
SS18-221ENST00000582448 BPIFB4P59827 614 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 CYP27A1Q02318 531 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 GCNT1Q02742 428 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 GFPT1Q06210 699 aaPredicted RBP10.81□□□□□ -0.68
SS18-221ENST00000582448 ELAVL2Q12926 359 aaKnown RBP10.81□□□□□ -0.68
SS18-221ENST00000582448 TRPC3Q13507 836 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 RAB33AQ14088 237 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 DCAF4L1Q3SXM0 396 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 GJB7Q6PEY0 223 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 OGFOD3Q6PK18 319 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 IRF2BP2Q7Z5L9 587 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 LMO3Q8TAP4 145 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 TAS1R2Q8TE23 839 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 ISL2Q96A47 359 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 CLDN23Q96B33 292 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 CCDC94Q9BW85 323 aaPredicted RBP10.81□□□□□ -0.68
SS18-221ENST00000582448 BRD9Q9H8M2 597 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 LMAN1LQ9HAT1 526 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 CPSF3Q9UKF6 684 aaKnown RBP10.81□□□□□ -0.68
SS18-221ENST00000582448 CDY1Q9Y6F8 540 aa10.81□□□□□ -0.68
SS18-221ENST00000582448 OAS3Q9Y6K5 1087 aaKnown RBP10.81□□□□□ -0.68
SS18-221ENST00000582448 MTCL1Q9Y4B5 1905 aaKnown RBP10.81□□□□□ -0.68
SS18-221ENST00000582448 OTOGLQ3ZCN5 2332 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 GPR179Q6PRD1 2367 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 I3L4J1 428 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 ECI2O75521 394 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 RECQL4O94761 1208 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 URI1O94763 535 aaPredicted RBP10.8□□□□□ -0.68
SS18-221ENST00000582448 HLA-DRAP01903 254 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 LRG1P02750 347 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 CEBPBP17676 345 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 PTPN2P17706 415 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 TNFAIP3P21580 790 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 TGM1P22735 817 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 PROZP22891 400 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 YARSP54577 528 aaKnown RBP10.8□□□□□ -0.68
SS18-221ENST00000582448 GP2P55259 537 aaKnown RBP10.8□□□□□ -0.68
SS18-221ENST00000582448 FZD5Q13467 585 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 SLC5A9Q2M3M2 681 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 ZACNQ401N2 412 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 PPM1JQ5JR12 505 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 GLRA4Q5JXX5 417 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 DPY19L2P1Q6NXN4 242 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 CRELD2Q6UXH1 353 aaPredicted RBP10.8□□□□□ -0.68
SS18-221ENST00000582448 CD302Q8IX05 232 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 RNF10Q8N5U6 811 aaKnown RBP10.8□□□□□ -0.68
SS18-221ENST00000582448 TRIM58Q8NG06 486 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 NOX5Q96PH1 765 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 NAPGQ99747 312 aaPredicted RBP10.8□□□□□ -0.68
SS18-221ENST00000582448 CDT1Q9H211 546 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 ASB7Q9H672 318 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 ZFP14Q9HCL3 533 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 PTPRHQ9HD43 1115 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 TOPORSQ9NS56 1045 aaPredicted RBP10.8□□□□□ -0.68
SS18-221ENST00000582448 SEPT11Q9NVA2 429 aaKnown RBP10.8□□□□□ -0.68
SS18-221ENST00000582448 ADAMTS1Q9UHI8 967 aa10.8□□□□□ -0.68
SS18-221ENST00000582448 TDRD15B5MCY1 1934 aaKnown RBP10.8□□□□□ -0.68
SS18-221ENST00000582448 CACNA1BQ00975 2339 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 FOXN3O00409 490 aaPredicted RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 MAN2B1O00754 1011 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 PRRG1O14668 218 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 PJA2O43164 708 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 C4BPAP04003 597 aaKnown RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 ADRB1P08588 477 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 KRT5P13647 590 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 TKTP29401 623 aaKnown RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 NTF4P34130 210 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 ARHGAP25P42331 645 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 BRCC3P46736 316 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 RPS9P46781 194 aaKnown RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 PDE6CP51160 858 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 CLCNKBP51801 687 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 OSTNP61366 133 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 YWHAEP62258 255 aaKnown RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 TFAMQ00059 246 aaKnown RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 PPP2R5DQ14738 602 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 NAB2Q15742 525 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 SGSM1Q2NKQ1 1148 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 ASTE1Q2TB18 679 aaPredicted RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 SEZ6Q53EL9 994 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 TDRD10Q5VZ19 366 aaKnown RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 LMBRD2Q68DH5 695 aaPredicted RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 ALKBH5Q6P6C2 394 aaKnown RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 C12orf40Q86WS4 652 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 ARHGEF19Q8IW93 802 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 CELF5Q8N6W0 485 aaKnown RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 MYRIPQ8NFW9 859 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 FAM3CQ92520 227 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 TAF4BQ92750 862 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 ELSPBP1Q96BH3 223 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 TCEAL4Q96EI5 215 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 ACAP3Q96P50 834 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 TRMT61BQ9BVS5 477 aaKnown RBP10.79□□□□□ -0.68
SS18-221ENST00000582448 HAPLN2Q9GZV7 340 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 PDZD7Q9H5P4 517 aa10.79□□□□□ -0.68
SS18-221ENST00000582448 GOLGA2P5Q9HBQ8 144 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms