RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 NIPA2Q8N8Q9 360 aa20.77■□□□□ 0.92
TOP3A-213ENST00000582230 SLC35G2Q8TBE7 412 aa20.77■□□□□ 0.92
TOP3A-213ENST00000582230 NTAN1Q96AB6 310 aa20.77■□□□□ 0.92
TOP3A-213ENST00000582230 TMA16Q96EY4 203 aaKnown RBP20.77■□□□□ 0.92
TOP3A-213ENST00000582230 C1orf74Q96LT6 269 aa20.77■□□□□ 0.92
TOP3A-213ENST00000582230 MRPS17Q9Y2R5 130 aaKnown RBP20.77■□□□□ 0.92
TOP3A-213ENST00000582230 GOLGA6L7A0A1B0GV03 622 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 NEDD8-MDP1E9PL57 170 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 ARHGAP6O43182 974 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 MTA2O94776 668 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 PENKP01210 267 aaPredicted RBP20.76■□□□□ 0.91
TOP3A-213ENST00000582230 TACR2P21452 398 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 SLC6A4P31645 630 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 SOX9P48436 509 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 VCPP55072 806 aaKnown RBP20.76■□□□□ 0.91
TOP3A-213ENST00000582230 RAB6CQ53S08 254 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 PIK3R6Q5UE93 754 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 CHSY1Q86X52 802 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 DDI1Q8WTU0 396 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 FAM3CQ92520 227 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 PDLIM2Q96JY6 352 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 XPO6Q96QU8 1125 aaKnown RBP20.76■□□□□ 0.91
TOP3A-213ENST00000582230 NELL2Q99435 816 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 PRMT1Q99873 361 aaKnown RBP20.76■□□□□ 0.91
TOP3A-213ENST00000582230 RAB6CQ9H0N0 254 aa20.76■□□□□ 0.91
TOP3A-213ENST00000582230 TYW5A2RUC4 315 aaKnown RBP20.75■□□□□ 0.91
TOP3A-213ENST00000582230 TMEM221A6NGB7 291 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.75■□□□□ 0.91
TOP3A-213ENST00000582230 F5H5T6 163 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 M0R296 226 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 CACNG3O60359 315 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 TSPAN3O60637 253 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 TYRP14679 529 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 PCK1P35558 622 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 GAB4Q2WGN9 574 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 PREPLQ4J6C6 727 aaPredicted RBP20.75■□□□□ 0.91
TOP3A-213ENST00000582230 FYB2Q5VWT5 728 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 RAP1GAP2Q684P5 730 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 SCYL2Q6P3W7 929 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 RFWD3Q6PCD5 774 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 SLFN11Q7Z7L1 901 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 HJURPQ8NCD3 748 aaPredicted RBP20.75■□□□□ 0.91
TOP3A-213ENST00000582230 MFSD1Q9H3U5 465 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 EPHX3Q9H6B9 360 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 ANLNQ9NQW6 1124 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 HS3ST4Q9Y661 456 aa20.75■□□□□ 0.91
TOP3A-213ENST00000582230 A0A0A6YYK5 440 aaPredicted RBP20.74■□□□□ 0.91
TOP3A-213ENST00000582230 KANSL1LA0AUZ9 987 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 I6L893 689 aaPredicted RBP20.74■□□□□ 0.91
TOP3A-213ENST00000582230 TRDMT1O14717 391 aaKnown RBP20.74■□□□□ 0.91
TOP3A-213ENST00000582230 ARHGAP25P42331 645 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 VAV2P52735 878 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 SCAPQ12770 1279 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 AUHQ13825 339 aaKnown RBP20.74■□□□□ 0.91
TOP3A-213ENST00000582230 TTC39BQ5VTQ0 682 aaPredicted RBP20.74■□□□□ 0.91
TOP3A-213ENST00000582230 SUGP1Q8IWZ8 645 aaKnown RBP20.74■□□□□ 0.91
TOP3A-213ENST00000582230 LGI2Q8N0V4 545 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 CHFRQ96EP1 664 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 P2RY13Q9BPV8 354 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 SLC2A11Q9BYW1 496 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 SIK2Q9H0K1 926 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 OSBPL2Q9H1P3 480 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 TBC1D17Q9HA65 648 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 OSGEPQ9NPF4 335 aa20.74■□□□□ 0.91
TOP3A-213ENST00000582230 REXO2Q9Y3B8 237 aaKnown RBP20.74■□□□□ 0.91
TOP3A-213ENST00000582230 SHISA7A6NL88 538 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 PRPSAP2O60256 369 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 LRCH4O75427 683 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 MIPP30301 263 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 OPRD1P41143 372 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 HADHBP55084 474 aaKnown RBP20.73■□□□□ 0.91
TOP3A-213ENST00000582230 RABGAP1LQ5R372 815 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 LRRC31Q6UY01 552 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 KIAA1328Q86T90 577 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 ETFBKMTQ8IXQ9 262 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 ARFGAP1Q8N6T3 406 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 CCDC185Q8N715 623 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 ZNF557Q8N988 423 aaPredicted RBP20.73■□□□□ 0.91
TOP3A-213ENST00000582230 ACRBPQ8NEB7 543 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 CD101Q93033 1021 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 BHMTQ93088 406 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 BTBD6Q96KE9 485 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 CALR3Q96L12 384 aaKnown RBP20.73■□□□□ 0.91
TOP3A-213ENST00000582230 PNKPQ96T60 521 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 PLK2Q9NYY3 685 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 DEC1Q9P2X7 70 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 COL4A2P08572 1712 aa20.73■□□□□ 0.91
TOP3A-213ENST00000582230 VCANP13611 3396 aa20.72■□□□□ 0.91
TOP3A-213ENST00000582230 BTNL10A8MVZ5 291 aa20.72■□□□□ 0.91
TOP3A-213ENST00000582230 STK25O00506 426 aa20.72■□□□□ 0.91
TOP3A-213ENST00000582230 TBL1XO60907 577 aa20.72■□□□□ 0.91
TOP3A-213ENST00000582230 PROSCO94903 275 aa20.72■□□□□ 0.91
TOP3A-213ENST00000582230 PTMAP06454 111 aaKnown RBP20.72■□□□□ 0.91
TOP3A-213ENST00000582230 HOXD9P28356 352 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-213ENST00000582230 GALK1P51570 392 aa20.72■□□□□ 0.91
TOP3A-213ENST00000582230 NRG1Q02297 640 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-213ENST00000582230 GRSF1Q12849 480 aaKnown RBP eCLIP20.72■□□□□ 0.91
TOP3A-213ENST00000582230 TMEM196Q5HYL7 178 aa20.72■□□□□ 0.91
TOP3A-213ENST00000582230 EFHC2Q5JST6 749 aa20.72■□□□□ 0.91
TOP3A-213ENST00000582230 RNF43Q68DV7 783 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms