RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 CLCN6P51797 869 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 NME3Q13232 169 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 SNX1Q13596 522 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 DHX34Q14147 1143 aaKnown RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 PDK2Q15119 407 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 ERMARDQ5T6L9 678 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 BSPRYQ5W0U4 402 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 TTC27Q6P3X3 843 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 RFX6Q8HWS3 928 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 IFT20Q8IY31 132 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 CCDC105Q8IYK2 499 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 TTC9BQ8N6N2 239 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 ITFG1Q8TB96 612 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 EDEM1Q92611 657 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 FGF14Q92915 247 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 CALN1Q9BXU9 219 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 MAK16Q9BXY0 300 aaKnown RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 DCLK3Q9C098 648 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 LRRC19Q9H756 370 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 EPB41L5Q9HCM4 733 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 SLC2A4RGQ9NR83 387 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 KRBA1A5PL33 1030 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 FAM187AA6NFU0 413 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 PRRG1O14668 218 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 ENDOD1O94919 500 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 RHOP08100 348 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 HAPLN1P10915 354 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-204ENST00000581979 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.32
SRSF1-204ENST00000581979 DYNLT1P63172 113 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 PITX1P78337 314 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-204ENST00000581979 ZC3H12AQ5D1E8 599 aaKnown RBP13.04□□□□□ -0.32
SRSF1-204ENST00000581979 OTUD1Q5VV17 481 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-204ENST00000581979 BTBD8Q5XKL5 378 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 PARM1Q6UWI2 310 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 TMCO3Q6UWJ1 677 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 MTSS1LQ765P7 747 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 FAM131BQ86XD5 332 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 NPAS3Q8IXF0 933 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 CCDC185Q8N715 623 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 FLCNQ8NFG4 579 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 NT5C3BQ969T7 300 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 PHOX2BQ99453 314 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 RPP25Q9BUL9 199 aaKnown RBP13.04□□□□□ -0.32
SRSF1-204ENST00000581979 RAB17Q9H0T7 212 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 FBXO44Q9H4M3 255 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 DHX35Q9H5Z1 703 aaKnown RBP13.04□□□□□ -0.32
SRSF1-204ENST00000581979 FAM204AQ9H8W3 233 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 CALCOCO1Q9P1Z2 691 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 AFF4Q9UHB7 1163 aaKnown RBP13.04□□□□□ -0.32
SRSF1-204ENST00000581979 PCYOX1Q9UHG3 505 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 RASAL2Q9UJF2 1139 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 AP4E1Q9UPM8 1137 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 EFR3BQ9Y2G0 817 aa13.04□□□□□ -0.32
SRSF1-204ENST00000581979 R3HDM2Q9Y2K5 976 aaKnown RBP13.04□□□□□ -0.32
SRSF1-204ENST00000581979 UTP11Q9Y3A2 253 aaKnown RBP13.04□□□□□ -0.32
SRSF1-204ENST00000581979 SOAT2O75908 522 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 SEC24AO95486 1093 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 LRG1P02750 347 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 PTPN2P17706 415 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 KCNJ1P48048 391 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 ARSEP51690 589 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 RPL10AP62906 217 aaKnown RBP13.03□□□□□ -0.32
SRSF1-204ENST00000581979 ADCY2Q08462 1091 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 DUSP4Q13115 394 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 DPYSL3Q14195 570 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 CCNG2Q16589 344 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 TAZQ16635 292 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 MAP9Q49MG5 647 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 CCNI2Q6ZMN8 369 aaPredicted RBP13.03□□□□□ -0.32
SRSF1-204ENST00000581979 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
SRSF1-204ENST00000581979 STKLD1Q8NE28 680 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 ADAM32Q8TC27 787 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.03□□□□□ -0.32
SRSF1-204ENST00000581979 GPR152Q8TDT2 470 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 ATG4AQ8WYN0 398 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 CCDC114Q96M63 670 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 CYP4F11Q9HBI6 524 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 GDF3Q9NR23 364 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 ABCC13Q9NSE7 274 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 INSL5Q9Y5Q6 135 aa13.03□□□□□ -0.32
SRSF1-204ENST00000581979 ESYT3A0FGR9 886 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 ZSCAN5CA6NGD5 496 aaPredicted RBP13.02□□□□□ -0.32
SRSF1-204ENST00000581979 PI15O43692 258 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 CST8O60676 142 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 RTN3O95197 1032 aaPredicted RBP13.02□□□□□ -0.32
SRSF1-204ENST00000581979 VNN2O95498 520 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 F9P00740 461 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 TNFRSF8P28908 595 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 PTGIRP43119 386 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 MMRN1Q13201 1228 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 CA9Q16790 459 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 SLC5A9Q2M3M2 681 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 PPP6R3Q5H9R7 873 aaPredicted RBP13.02□□□□□ -0.32
SRSF1-204ENST00000581979 DENND5BQ6ZUT9 1274 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 BEND5Q7L4P6 421 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 BNIPLQ7Z465 357 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 JAMLQ86YT9 394 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 GRK7Q8WTQ7 553 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 IFT81Q8WYA0 676 aa13.02□□□□□ -0.32
SRSF1-204ENST00000581979 HAUS1Q96CS2 278 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms